Panicum virgatum (switchgrass): 120644711
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Entry
120644711 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120644711
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120644711
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120644711
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
DUF4302
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
120644711
NCBI-ProteinID:
XP_039777327
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All DBs
Position
8K:complement(41434815..41439256)
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AA seq
384 aa
AA seq
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MASGTDDKTKTEGLTSAAAFVEGGIQDACDDACSICLEAFCESDPSALTSCKHEFHLQCI
LEWCQRSSQCPMCWQPISMKDPTSQELLEAVERERNIRTNQTRNTTIFHHPALGDFELQH
LPVVGNDAELEERILQHLAAAAAMGRAHHLGRREGHRGRSGSHGRPQFLVFSAHPNSPST
GTISSSSAHVEGDYDSNPVNPRASESSPRAIRIGDAGNQSPGMLTYDAEQDAVVSSGNST
PVSSPRFFNRRHSTGQSTPDRAGPSDVQSFSDSLKSRLNAVSMKYKESITKSTRGWKERL
FSRNSSVADLGSEVRREVNAGIASVSRMMERLETRGSSRTGDSPTASTSEVPPPTESSNE
RAPESNAASSTSTSTSASNSCLSV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggaactgatgacaaaactaagacggagggtttgacatcagctgcagccttt
gtagagggcggcattcaggatgcatgcgatgatgcatgtagcatttgccttgaggctttc
tgtgagagtgacccttctgcattgaccagctgcaaacatgagttccatctccaatgcatt
ctggaatggtgtcagagaagttcacagtgcccaatgtgttggcagccaattagtatgaag
gatcctaccagccaggagctgcttgaggcagtagaacgcgagaggaacataagaaccaat
caaactcgaaacacaactatattccatcatcctgctcttggggattttgagctgcagcat
ttacctgttgttggtaatgatgctgagcttgaagagcgtatactacagcatctagcggct
gccgctgcaatgggaagggcacaccatcttggaagaagggaggggcacaggggccgttct
ggctctcatggtcgcccacagttcctagttttctctgctcatccaaattcaccttctacc
ggcacaatttcttcctcttctgctcatgtggagggggactatgattcaaatcctgttaac
cctagagctagtgagtcatctccacgagctattcgcattggagacgctggtaaccaaagc
cctgggatgcttacctatgatgctgaacaggatgctgtcgtttcttctggaaatagcact
cctgtatcaagtcctaggttttttaacaggagacactccactgggcagtcaactccagac
agggctggaccgtcggatgttcagtctttctcagactctctgaagtctcgcctgaatgct
gtctcgatgaagtacaaagaatctattacgaagagtactcgagggtggaaggagagactc
ttttcgcgcaactcatctgtggcggatcttggttctgaagtaagaagagaagttaatgct
ggaattgcctctgtgtcaaggatgatggagcgcctggaaactagaggaagtagcagaaca
ggtgatagcccaacagcatccacatctgaagttcctcctcctacagagtcaagcaatgaa
agggctccagagagcaacgctgcttctagtacttctacatctacaagtgcaagcaacagt
tgtttatcggtataa
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