Panicum virgatum (switchgrass): 120644788
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Entry
120644788 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120644788
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120644788
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120644788
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120644788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Spectrin
Motif
Other DBs
NCBI-GeneID:
120644788
NCBI-ProteinID:
XP_039777430
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All DBs
Position
8K:complement(43433564..43437194)
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AA seq
533 aa
AA seq
DB search
MRAAVALRALLIATACGLVFALLNLPLPDGRAGSTPPGGERGAGGGGGPRLSVVEQGLIR
EARRLNTVAEERDGQSDESAAEEDERISKSPPDTKEKIWMMQDQLIMAKAYLHFASPQGS
AHLVRELKLRIKEIERAISHSSGGSHIPGSALQKMKAMEQTLSKAQRTYPRCSQMTSKLR
AMTHNSEELVRAHQSESSFLEQVAVRTLPKGHHCLAMRLTTEYFSLDPKEREFPKRDSRQ
LDGYYHYAIFSDNVLASAVVVNSTITASKDPGRIMLHIVTDALNYPAMMMWFLTNPPTPA
AIEVESLDDFKWLPGDFSSRFKLKGVRDPRYTSALNHLRFYLPEVFPSLSKVLLLDHDVV
VQKDLSELWGIDMKGKVIGAVETCTSGEGYHRLDSLVDFSNPTIVNKFDAKACIFAFGMN
IFDLNEWRKQGLTATYHKWFQVGKRLRLWKAGSQPLGQLVFYNQTLPLNRRWHVLGLGHD
FSIGRDELESAYVIHYSGKFKPWLEISIPKYRDNWNRHLNYDNAYLQQCNIHG
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggccgtcgcgctgcgggcgctgctgatcgcgaccgcctgcggcctcgtcttc
gcgctgctcaacctccccctccccgacggccgcgccggctccacgccccccggtggggag
cgcggcgcgggtgggggaggcgggccccgcctgtcggtggtggagcaggggctgatccgg
gaggccaggaggctcaacactgtcgccgaagagagagatgggcaaagcgatgaaagtgct
gctgaagaagatgaaagaatatcaaaatctcccccggacactaaagagaagatatggatg
atgcaagatcagctaattatggccaaggcgtacttgcatttcgcttctccccaaggcagt
gcacatttagttcgagagctgaagttgaggataaaagagatcgagagggcaataagccac
tcaagtggaggttcccatatacctgggagtgcattgcagaaaatgaaggccatggaacag
accctttccaaggctcagaggacctacccacgctgctctcagatgacatcaaagctacgt
gcaatgacacacaacagtgaagaattagtaagagcacaccaaagtgaatcttcattcctt
gagcaggttgctgtgaggacattacccaaaggccatcactgcctagcaatgcgacttacc
acagagtacttttcgttagatcctaaggaacgtgaattccctaaaagagacagcaggcag
ttagatggctattatcattatgcgatattctcagacaatgtacttgcaagcgctgtggtt
gtcaactctacaattactgcatcaaaggatcctggaaggataatgttacatattgtaact
gatgcattgaattatcctgcaatgatgatgtggtttctgacaaacccaccaactccagca
gcaatagaagttgaaagcctggatgatttcaaatggttgcctggtgatttcagttctaga
tttaagcttaagggtgttcgagatccaagatacacttctgcacttaaccacttgcgtttt
tatttgccggaagtgtttccctctttgagcaaggttctactcttggaccatgatgtggta
gtccagaaagacttaagtgaattatggggcatagatatgaagggtaaagtaattggtgct
gttgaaacatgcacttcaggtgaaggttaccatcgattggatagccttgttgatttttct
aatccaactattgtcaacaaatttgatgccaaggcttgtatctttgcttttgggatgaac
atatttgacctgaatgaatggcgcaagcagggtttaactgcaacttatcataaatggttt
caagtgggcaaaaggctgaggttatggaaggcaggaagccagccactgggccaactcgtc
ttctacaaccaaacactgcctctcaaccgccgatggcatgttctcgggcttggccatgat
tttagcattggaagagacgaacttgagagcgcctatgtcatccactacagcgggaaattc
aaaccctggctggaaatctccatcccaaagtacagagacaactggaatagacaccttaac
tacgataatgcatacttgcagcagtgtaacatccacggatag
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