KEGG   Panicum virgatum (switchgrass): 120644818
Entry
120644818         CDS       T07260                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-like isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    120644818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120644818
Membrane trafficking [BR:pvir04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    120644818
   mTORC2 complex
    120644818
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_SPT8 VPS8_N Beta-prop_WDR35_TULP_N Beta-prop_At4g14310 CPSF_A Beta-prop_pof12 Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 120644818
NCBI-ProteinID: XP_039777471
LinkDB
Position
8K:43999175..44002992
AA seq 338 aa
MASPRSRSLRACLDVWQDICCKMAQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQV
NRLEITPDKGFLAAAGNPHIRLFDVNSNSPQPVISYDSHTSNVMAVGFHCDGNWMYSGSG
DGTVRIWDLRTGTCQREYESRAAVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELV
PEVDTAVKSLTVMWDGSMVVAANNRGTCYVWRLLKGTQTITCFEPLHKLQAYDGYILKCL
LSPEFCDPNRYLATASSDHTVKIWNVDGFKLERTLVGYQRWVWDCVFSVDGAYLITASSD
TTARLWTMSTGEAIRVYQGHHKATVCCAIHDGAESAPS
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggcgtctccacggtccagaagtctgagagcatgtcttgatgtatggcaggatatatgc
tgcaaaatggctcaaccttctgtcattcttgcaactgcaagctatgatcacacaatcaga
ttttgggaagccaagagtggtcgctgttatcgtacaattcaataccctgactctcaagtt
aatcgtcttgagataaccccagacaagggattcttagctgctgccggcaatcctcatatc
cgcctttttgacgtcaattcaaatagccctcaaccggtaatcagctatgattcacatact
agtaatgtgatggctgtgggattccattgtgatggtaactggatgtactctggctctggg
gatggtactgtgagaatctgggatttacgaactggcacttgtcagcgagaatacgagagt
cgtgcagctgtcaacactgtagtcctacacccaaatcagaaagaactgatatctggtgat
cagaatggaaacatacgtgtgtgggatttagctgcgaactcttgcagctgtgaactggta
cccgaggttgatactgctgtaaaatctctgacagttatgtgggatgggagtatggtggtt
gctgcaaataaccgtgggacatgttacgtttggcgcctgctcaagggtactcagacaatt
acctgctttgaacctctacacaaactgcaagcctatgatggctacattctgaaatgcctg
ctttcaccagaattttgcgaccctaacaggtatcttgccacagcatcatctgaccacact
gtaaagatttggaatgtcgatggcttcaagttggaaagaactctagtcggctatcaacgc
tgggtttgggactgtgtgttctccgtcgatggcgcttatctcataactgcatcttctgac
accacggcgaggctgtggacgatgtcgaccggagaggccatccgggtgtaccagggccac
cacaaggccaccgtgtgctgcgccatccatgatggagccgaatcggccccctcataa

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