Panicum virgatum (switchgrass): 120645105
Help
Entry
120645105 CDS
T07260
Name
(RefSeq) aspartate aminotransferase, chloroplastic-like
KO
K00811
aspartate aminotransferase, chloroplastic [EC:
2.6.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00220
Arginine biosynthesis
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00270
Cysteine and methionine metabolism
pvir00330
Arginine and proline metabolism
pvir00350
Tyrosine metabolism
pvir00360
Phenylalanine metabolism
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir00950
Isoquinoline alkaloid biosynthesis
pvir00960
Tropane, piperidine and pyridine alkaloid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120645105
00270 Cysteine and methionine metabolism
120645105
00220 Arginine biosynthesis
120645105
00330 Arginine and proline metabolism
120645105
00350 Tyrosine metabolism
120645105
00360 Phenylalanine metabolism
120645105
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120645105
09110 Biosynthesis of other secondary metabolites
00950 Isoquinoline alkaloid biosynthesis
120645105
00960 Tropane, piperidine and pyridine alkaloid biosynthesis
120645105
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120645105
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.1 aspartate transaminase
120645105
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class I
120645105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
120645105
NCBI-ProteinID:
XP_039777790
LinkDB
All DBs
Position
1K:54612961..54616667
Genome browser
AA seq
457 aa
AA seq
DB search
MASAAFALTSPAASAVAARSKVLGGGKSQGRNGCRVGITRKNFGHVMMALAVDVSRFEGV
PMAPPDPILGVSEAFKADKNDLKLNLGVGAYRTEELQPYVLNVVKKAENLMLEKGENKEY
LPIEGLAAFNKATAELLLGADNPVIKQGLVATLQSLSGTGSLRLAAAFIQRYFPEAKVLI
SSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIEAAPEGSFVLLHGCAHNPT
GIDPSPEQWEKIADAIQEKKHMPFFDVAYQGFASGSLDEDASSVRLFVKRGMEVFVAQSY
SKNLGLYAERIGAINVVCSAPEVADRVKSQLKRLARPMYSNPPIHGARIVANIVGDPTMF
GEWKQEMEQMAGRIKNVRQKLYDSLSAKDKSGKDWSFILRQIGMFSYTGLNKAQSDNMTD
KWHVYMTKDGRISLAGLSLAKCDYLADAIIDSFHNVS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccgccttcgccctcacctcgccggcggcctccgccgtcgccgcccggtcc
aaggtgcttggagggggaaagagtcaggggagaaatggctgccgcgtggggatcacgagg
aagaactttggccatgttatgatggcccttgcagtggatgtttctcgttttgagggagtg
ccaatggctcctccagacccaattcttggggtttcagaggcctttaaagcagataaaaac
gacctgaagctcaatcttggtgttggtgcctatagaacagaagagttgcaaccctatgtc
ctcaatgtagtcaagaaggctgaaaatcttatgttggagaaaggagaaaacaaagagtat
cttcctattgaaggcttagctgcatttaacaaagcaactgcagagctactgcttggagct
gacaaccctgtcatcaagcaaggacttgttgctacacttcaatctctctcaggcactgga
tcgctacgactagctgcagcatttatacaaagatacttccctgaagccaaagtacttata
tcatcacccacgtgggggaaccacaagaacatcttcaatgatgctagggtaccttggtca
gagtaccggtactatgaccccaagactgttgggttagattttgagggaatgatagctgac
attgaggctgctcctgaaggatcttttgttctgctacatggttgcgctcacaacccaact
ggaatagacccaagtcctgaacaatgggagaaaattgcagatgctattcaagagaaaaag
catatgcctttcttcgatgttgcatatcagggttttgccagtggaagccttgatgaagat
gcatcttcagttaggctttttgttaagcgtggcatggaagtatttgtcgcacaatcttac
agcaagaaccttggtctatatgcagaaaggattggggcaataaatgttgtttgctcagca
ccagaagttgcagatagggtaaagagccagctgaaacgtctggcacgtcccatgtactcg
aaccccccaattcatggtgctaggatagttgccaatattgttggtgatccaactatgttt
ggtgaatggaagcaggagatggaacaaatggctgggcggatcaagaatgtaaggcagaag
ctctatgatagtttgtctgcaaaggacaagagtggcaaggactggtctttcattctgagg
cagattggcatgttctcttacactggattgaacaaagcacagagtgataacatgacagat
aaatggcatgtttatatgaccaaggatggtcggatttcgttagctggactttccctggct
aagtgcgattatcttgctgacgccatcatcgattctttccataatgtcagctag
DBGET
integrated database retrieval system
