Panicum virgatum (switchgrass): 120645139
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Entry
120645139 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 19-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120645139
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120645139
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120645139
NCBI-ProteinID:
XP_039777833
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Position
8K:51712215..51714966
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AA seq
491 aa
AA seq
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MSSAPLLGDCGNGDGMGAASKGGGQEQLPWWSRWLGRMVDTEEAEAEAQLRFAVPMVVTS
MAYYGIPLVSVMFSGHLGDVHLAGATLGNSWATVTGYAFVMGLSGALETLCGKAYGARLY
RMLGLYLQSSCIMSAAVSALISVLWYFTEPLLLFLQQDPDVSHAAAVFVQAQIPALFAFA
FIQCLLRYLQTQSVVLPLVVCSVAPFALHILLAHLLVNVLGLGLAGASAAVSATLWLSCL
MLLAYVLLSEKFSETWRGFSADAFKYVLPTVKLATPSAIMVCLELWAFELLVLIAGLLPN
PTVDTPLIAMCSSTEAIICMISVGFSAAVSTRVANEIGAGNVDRARNAVSVTMKLSVFLA
ISFVLLLGLGHDLWASLFSRSSTIVSQFAAITPLMMISIVLDSAQGVLAGVSRGCGWQHL
AAMTNLVAFYLVGMPLAILFAFKLKFYAKGLWAGLICGVTCQACSLLVITVRTKWSKLVE
VMQEEKANYVA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggctcccctgctcggcgactgcggcaatggcgatggcatgggcgccgccagc
aaaggtggcggccaggagcagctgccgtggtggtcacggtggctggggcgcatggtggac
acggaggaggcggaggcggaggcgcagctgcggttcgcggtgccgatggtggtgaccagc
atggcctactacggcatcccgctggtgtcggtgatgttctcgggccacctcggcgatgtc
cacctcgccggcgccacgctcggcaactcctgggccaccgtcaccggctacgccttcgtg
atgggcctgagcggcgccctagagacgctatgtgggaaggcgtatggcgcccggctgtac
cgcatgctgggcctgtacctgcagtcatcgtgcatcatgtcggccgccgtgtcggcgctc
atctctgtactctggtacttcacggagccactgctgctgttccttcagcaggaccccgat
gtgtcccatgctgccgcggtgttcgtccaggcccagatcccagccctctttgcgttcgcc
ttcatacagtgcctgctccgatacctgcagacacagtccgtggtgctcccgctcgtcgtc
tgctccgtggcgcccttcgccctccacatccttctcgcgcacctgctggtgaacgtgctc
ggcctggggctcgctggcgcctccgctgcggtctcggcgacactatggctgtcctgcctg
atgctgctcgcctacgtgcttctctccgagaagttcagtgagacatggagggggttctcc
gctgacgccttcaagtacgtgctacccaccgtgaagctcgccacgccgtcagccatcatg
gtctgcttagagctatgggcgttcgagctcctggtgctcatcgccggtttgctaccgaat
cccaccgttgacacgccgctgatcgccatgtgctctagcacggaggcgattatctgcatg
atctcagttgggttcagtgccgcggtgagcacacgggtggcgaacgagatcggcgcgggg
aacgtggaccgggcgaggaacgcggtgtcggtgacgatgaagctctcggtgttcctcgcc
atctccttcgtgctgctcctggggttgggccacgacctatgggcgagcctcttcagccgg
agctccacgatcgtgtcccagttcgcggccatcacgccgctcatgatgatctccattgtg
cttgactcggcgcagggcgtcctggcaggtgtgtcgcggggctgcgggtggcagcacctg
gctgcaatgaccaacctggtggccttctacttggtcggcatgccgctcgccatcctcttc
gccttcaaactcaagttctatgccaagggtttgtgggcggggctgatttgtggggtgaca
tgccaagcctgctcattgctggtgatcaccgtccgcaccaagtggtcgaagctcgtggag
gtcatgcaggaggagaaagccaactacgtcgcgtag
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