Panicum virgatum (switchgrass): 120645279
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Entry
120645279 CDS
T07260
Name
(RefSeq) ATP-citrate synthase alpha chain protein 2-like
KO
K01648
ATP citrate (pro-S)-lyase [EC:
2.3.3.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120645279
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120645279
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.8 ATP citrate synthase
120645279
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120645279
Exosomal proteins of bladder cancer cells
120645279
Exosomal proteins of melanoma cells
120645279
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Gene cluster
GFIT
Motif
Pfam:
Citrate_bind
Citrate_synth_N
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
120645279
NCBI-ProteinID:
XP_039778019
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Position
8K:55058471..55061870
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AA seq
423 aa
AA seq
DB search
MARKKIREYDSKRLLKENLKRLAGIDLTILSAQITQSTDFAELVSQQPWLSTTKLVVKPD
MLFGKRGKSGLVALNLDFDQVKEFVKERLGVEIEMGGCKAPITTFIVEPFVPHDQEYYLS
IVSERLGSTISFSECGGIEIEENWDKVKTVFLPTEKPMTPDACAPLIATLPLEARGKIGD
FIKGVFAVFQDLDFSFMEMNPFTMVNGEPYPLDMRGELDDTAAFKNFKKWGAIEFPLPFG
RVLSPTESFIHELDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
YAEYSGAPNEEEVLHYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFNGIIRALRE
KESNLKASRMHIYVRRGGPNYQSGLAKMRKLGAELGIPIEVYGPEATMTGICKQAIECIM
AAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagaacctcaag
cgcctcgccggcatcgacctcaccatcctctccgcccagatcacacaatcaacagacttt
gcagagcttgtgagccagcagccatggctgtcaaccacaaagttggtcgtgaagcccgat
atgctgtttgggaagcgtggcaagagtggcctggtggccctcaaccttgattttgatcaa
gtcaaggagtttgtgaaggagcggttgggagtcgagattgagatgggtggctgcaaggct
ccaatcacgaccttcattgttgaaccatttgtgccccatgatcaagagtattacctatcg
attgtgtcagagaggctgggcagcaccatcagcttctcagagtgtggtgggattgagatc
gaggagaactgggacaaggttaagacggtttttcttccaactgagaagccaatgacacca
gacgcatgtgctcccttgatcgccacccttccattggaggcacgcggaaaaattggtgac
ttcatcaaaggagtgtttgctgtcttccaagacctggacttctcatttatggagatgaac
ccatttaccatggtgaatggggagccatatcctctggacatgagaggagaactagatgat
acagcagctttcaaaaacttcaagaagtggggagctattgaattccctctaccatttgga
agagtactgagccctacagaaagtttcatccatgaactagatgagaagacaagtgcctct
ctgaagtttacagttttgaacccaaagggacgcatctggacaatggttgctggaggtggt
gctagtgtcatatacgctgatactgttggagatttggggtatgcttcagagcttggaaac
tatgcagagtatagtggtgctcccaacgaggaggaggttctgcattatgctagagtcgta
cttgattgtgcgactgctgatcccgatggtcgtaagagggcacttctcattggaggtggc
attgctaactttactgatgtggctgccacattcaatggcatcatccgggccttaagagag
aaggaatccaacttgaaggcttcaaggatgcacatttatgttcgcagaggtggcccgaat
taccaatctggactggctaaaatgcgtaaacttggtgcagagcttggcattccaattgag
gtgtatgggccagaagcgacgatgacaggaatctgcaaacaagcaattgaatgcatcatg
gctgcagcataa
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