Panicum virgatum (switchgrass): 120645287
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Entry
120645287 CDS
T07260
Name
(RefSeq) myb-related protein MYBAS1-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120645287
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120645287
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF3683
DUF5732
Motif
Other DBs
NCBI-GeneID:
120645287
NCBI-ProteinID:
XP_039778027
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All DBs
Position
8K:complement(55229944..55231310)
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AA seq
231 aa
AA seq
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MVTVREEMRKGPWTEQEDMQLVCTVRLFGDRRWDFIAQVSGLNRTGKSCRLRWVNYLHPG
LKHGRMSPKEERLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKMSIS
PSSSSSSVTYQSCLLDTCPVIGMGTGDTHNGSSCVTSSLESTQSAMDAYPIDQIWREIEA
PQASAFLNIAEGKEKTCSSIPCPLPSPAMWDYKCPEIFWKMADEEIRMLAP
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggtgactgtcagagaggagatgcgtaaggggccatggacagagcaggaggacatgcaa
ctggtatgcactgtccgcctgttcggtgaccgtcgttgggacttcattgcccaagtctca
ggcctcaacaggacaggaaagagctgccgcctccggtgggtgaactacctccaccctggc
ctcaaacatggccgcatgtccccaaaagaggagcgccttattattgagctccatgctcgg
tgggggaacaggtggtctaggatagcacggaggctgccagggcgcacagacaatgagatc
aagaactactggaggacacacatgagaaagaaggcacaagagagaaagatgagcatatca
ccttcatcctcatcctcttcagtgacataccaatcctgccttcttgacacctgtccagtc
attgggatgggcactggtgacactcacaacggcagtagctgtgtcaccagctcccttgag
agcacccagagtgccatggatgcatatcccattgatcagatatggagggagatcgaggca
ccacaggcatctgccttcctgaacattgctgaaggaaaagagaagacatgcagcagtatt
ccctgtcctctgccatcacctgctatgtgggattataaatgccctgagatattctggaag
atggcagatgaagaaatcaggatgttggctccataa
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