KEGG   Panicum virgatum (switchgrass): 120645299
Entry
120645299         CDS       T07260                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 1-like
  KO
K12191  charged multivesicular body protein 2A
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120645299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120645299
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120645299
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    120645299
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120645299
  Exosomal proteins of other body fluids (saliva and urine)
   120645299
  Exosomal proteins of colorectal cancer cells
   120645299
SSDB
Motif
Pfam: Snf7 HTH_6 Expansin_C Spc24
Other DBs
NCBI-GeneID: 120645299
NCBI-ProteinID: XP_039778034
LinkDB
Position
8K:complement(55356654..55359521)
AA seq 224 aa
MSFIFGKKKTPAELLRENKRMLEKSIRDIERERQGLQNQERKLINEIKKVAKQGQMGAVK
IMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
ALQKIMREFEMQNEKMEMVSEVMNDAIDDALEGDEEEEETEELVNQVLDEIGIDVNSELV
KAPATAVAQPVAAGKVPAQAEAAGGVDGGIDDDLQARLDNLRKM
NT seq 675 nt   +upstreamnt  +downstreamnt
atgagcttcatcttcggcaagaagaagaccccagccgagctgctgcgggagaataagcgg
atgctggagaagtccatcagggatattgagagggagaggcagggcctgcagaaccaggag
aggaagctcatcaacgagatcaagaaggtggccaagcagggacagatgggagctgtaaaa
atcatggcgaaggaccttatccgcacaaggcaccagataacaaaattttatgccctgaaa
tcccagctacaaggtgtatctcttcgcattcagacactgaaatcaacacaagcaatgggt
gaagctatgaagggtgtcacaaaagctatgggacaaatgaacaggcagatgaatctgcct
gctctgcagaagataatgcgggagttcgagatgcaaaatgagaagatggagatggttagt
gaagtgatgaacgatgccatcgatgatgcattggagggcgacgaggaggaggaagagaca
gaagagctagtcaaccaagtcctcgatgaaattggcattgatgtcaactccgagcttgtc
aaggctcctgccactgcagttgctcaacctgtcgcagcaggaaaagttccggctcaagct
gaagccgcaggtggggtggatggtggaatagatgatgacttgcaggcacggcttgataac
ctgaggaagatgtga

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