Panicum virgatum (switchgrass): 120645368
Help
Entry
120645368 CDS
T07260
Name
(RefSeq) polyubiquitin-B-like
KO
K08770
ubiquitin C
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120645368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120645368
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120645368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
OTU1_UBXL
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
120645368
NCBI-ProteinID:
XP_039778094
LinkDB
All DBs
Position
8K:6826391..6827554
Genome browser
AA seq
387 aa
AA seq
DB search
MEIFVKMLTGKTIVVEVESSDTIEKVKAKIEEKDGIPPDMQRLIFHSNELKDEHTVGCYG
IKDKSSVHLVLRHGGNCDMFVYVKVLAGGDAITLEVEPSDTVGDVREKVRSHQRLLFAGT
RLEDGRRIGDYRFQYERSTPTLHLDFGVQMQVHVRTATGKTITMDVEPSDTVRNVKAKIH
DRQRIIFEGKPLHGCVSLANHNVHKESTLHLDLSPRYHGGGGGGSRMQVFVKALSGKTIK
LKVKPSYTIGEVKAMVQNQQRLFFGGNQQLQDGRTLADYDVQRESTLLLDLGMRVSVSSF
TGPQTITLVVAPDDTADDVKERIRGPQTLVFDGRELEDGQTLAEAHVKRDSTLHLTSACT
VAVQILVKSSYIKIIRAPRGAELRMKL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagatctttgtgaagatgctcaccggcaaaaccatcgttgtggaggtggagtcctct
gacacaattgagaaggtcaaggcaaagatcgaggagaaggatggcatccccccagacatg
cagaggctcatctttcattcaaatgagctcaaggatgagcacacggtgggctgttacggt
atcaaggacaagtccagcgtgcatcttgttctgcgtcatggtggcaactgcgacatgttc
gtgtacgtgaaggtgctcgccggcggcgatgccatcaccctggaggtggagccgtcggac
acggtcggcgacgtgagggagaaggtccgcagccaccagaggcttctcttcgccggcacg
cgtctcgaggatggacggagaatcggagactacagattccagtatgagcgcagcaccccc
accctgcacctggactttggcgtccagatgcaggtccacgtgaggaccgctaccggcaag
accatcaccatggatgtggagccatccgacacggtccgcaacgtgaaggccaagatccat
gaccggcagaggatcatctttgaaggcaagccgctacacggctgcgtcagcctcgccaat
cacaacgtccacaaggagtccaccctgcacctcgacctctccccgaggtatcatggcggc
ggcggcggcggcagcaggatgcaggtcttcgtgaaggcgctctccggcaagacgatcaag
ctcaaggtgaagccatcttacacgatcggcgaagtgaaggcgatggttcagaaccagcag
aggctcttcttcggtggcaaccagcagcttcaggacgggcggacgctcgccgactacgat
gttcagagggagtccaccctgctgcttgatcttggcatgcgcgtttccgtgagcagcttc
actggcccgcagaccatcacgctggtggtggcgccagatgacacggctgatgatgtgaag
gagaggattcggggcccgcagactctcgtcttcgacggcagagagcttgaggatgggcag
acacttgctgaggcccatgtcaagagagattccacgctgcacctgacctctgcctgcacg
gtggcagtgcagatcttggtgaagtcgtcgtacatcaagatcatccgggcacctcgaggc
gcagaattaaggatgaagctgtag
DBGET
integrated database retrieval system
