Panicum virgatum (switchgrass): 120645369
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Entry
120645369 CDS
T07260
Name
(RefSeq) BTB/POZ domain-containing protein At1g01640-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120645369
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120645369
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Gene cluster
GFIT
Motif
Pfam:
BTB
BTB_KLHL33
DUF3160
Motif
Other DBs
NCBI-GeneID:
120645369
NCBI-ProteinID:
XP_039778095
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All DBs
Position
8K:complement(6827537..>6828364)
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AA seq
206 aa
AA seq
DB search
YPPPTSGLGLHYRRPINQAQLTSSTACPRLVFPFLQAARSEVFRHVLSGDERFKVPAGDS
ISLPELSHNELSHLLAFFYTGALEEGDGGVVPEQEERRRRHYYALLVAADKYDVPFLRRA
CEARLAAGVEPRNALRTLEVEELSSSAALMERAMGTVLEHAEEVVFSAEYGEFAARNAGL
CFEITRALLANKMSRTTTNCTELESS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
tacccaccgccaacaagtgggctgggcctccactaccgcagaccaataaaccaagcccag
ctcacgagctccaccgcgtgtccgcgtctcgtgtttcctttcctgcaggccgcgcggtcg
gaggtgttccggcacgtgctgtccggcgacgagcgcttcaaggtccccgccggcgactcc
atctccctcccggagctctcccacaacgagctatcccacctcctcgccttcttctacacc
ggcgcgctcgaagaaggcgatggcggggttgtccccgagcaggaggagcggcggcggcgg
cactactacgcgctgctggtggcggcggacaagtacgacgtgccgttcctgcggcgggcg
tgcgaggcgcggctggcggcgggcgtggagccccggaacgcgctgcggacgctggaggtg
gaggagctgagctccagcgccgcgctcatggagcgcgccatgggcacggtgctggagcac
gcggaggaggtggtgttctccgcagagtacggcgagttcgccgccaggaacgccgggctg
tgcttcgagatcacccgggcgctgctggccaacaagatgtcgaggacgacgactaactgc
acagagcttgaaagcagctaa
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