KEGG   Panicum virgatum (switchgrass): 120645405
Entry
120645405         CDS       T07260                                 
Name
(RefSeq) ribonucleoside-diphosphate reductase large subunit-like isoform X1
  KO
K10807  ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00230  Purine metabolism
pvir00240  Pyrimidine metabolism
pvir00480  Glutathione metabolism
pvir01100  Metabolic pathways
pvir01232  Nucleotide metabolism
Module
pvir_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pvir_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    120645405
   00240 Pyrimidine metabolism
    120645405
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    120645405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120645405
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     120645405
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    120645405
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone
Other DBs
NCBI-GeneID: 120645405
NCBI-ProteinID: XP_039778126
LinkDB
Position
1K:54883756..54888957
AA seq 810 aa
MYVVKRDGRQESVHFDKITARLKKLSYGLSAEHCDPVLVAQKVCAGVYKGVTTNQIGELA
AETAAAMTASHPDYASLAGRIAVSNLHKNTMKSFSETVKILYMHCDERSGLMAPMIADDV
YGIIMKNAARLDSEINYERDFDYDYFGFKTLERSYLLKVDGKVVERPQHMLMRVSVGIHK
DDIESAVRTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAA
ISKSAGGIGISIHSIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
LEPWHPDIFDFLDLRKNHGKEENRARDLFYALWVPDLFMERVQRNEQWSLFCPNEAPGLA
DCWGDEFQNLYHKYEREGKAKKVVSAQALWFDILKAQIETGTPYMLYKDTCNRKSNQQNL
GTIKSSNLCTEIIEYTSPSETAVCNLASIALPRFVREKGVPIESHPAKLVGSSGSKNRYF
DFDKLAEITSTVTYNLNKIIDISYYPIESARRSNMRHRPIGIGVQGLADAFILLGMPFDS
PEAQQLNKDIFETIYYHALKASADLAAKEGPYETYAGSPVSKGILQPDMWNVVPSDRWNW
SAIREVISQVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVIVNKHL
LHDLTEIGVWSPILKNKIIYEDGSVQKVIEVPDDLKAVYKTVWEIKQKTIVDMAADRGCY
IDQSQSLNIHMDQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQ
QTSEEEDVQAKMAQVVCSLNNRDECLACGS
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgtacgtggtgaagcgcgacggccggcaggagtcggtccacttcgacaagatcaccgcg
cggctcaagaagctcagctacggcctcagcgcggagcactgcgaccccgtcctcgtcgca
cagaaggtctgcgctggcgtctacaagggcgtcaccaccaaccagatcggcgagctcgcc
gccgagaccgccgctgctatgaccgcctcgcaccccgactacgcatcgctggcgggcagg
atcgccgtctccaacctgcacaagaacaccatgaaatccttctcagagacggtaaagatt
ctgtatatgcattgcgacgagaggtctggcttgatggctcccatgattgctgatgatgtc
tacgggatcataatgaagaatgctgctcgcttggacagtgagataaattatgagcgagat
tttgactatgattattttggttttaagacactcgagaggtcttatctgttgaaagttgat
ggaaaggtcgtggaaaggccacagcatatgttgatgagagtttctgttggcatacataag
gatgatattgaatctgctgtcagaacataccacatgatgtctcagcgctggttcactcat
gcttccccgacccttttcaatgctggcactccaaggccccagctaagcagctgcttcctt
atctgcatgaaagatgatagtattgagggaatttatgatactctctcagaatgtgctgca
ataagcaaatctgctggaggaattggtatatcaatccacagcattcgagctactgggagt
tacattcgaggaacaaatggaacttctaatggaattgttcctatgctacgtgttttcaat
gatactgcccgttatgttgatcaaggtggaggcaagagaaaaggtgcattcgctgtatat
ttggagccttggcatcctgatatctttgacttccttgatctaaggaagaaccatggaaag
gaggagaatcgtgcaagagatcttttctatgctctgtgggttcctgatctattcatggaa
agggtacagcgcaatgaacagtggtcactgttttgtcccaatgaagctccaggtttggct
gattgctggggagatgagtttcaaaatctgtaccataaatatgaaagagagggaaaggca
aagaaagtagtttcagcgcaggctctctggtttgatattttgaaggcacagattgaaact
ggaacaccctatatgctttataaggatacttgcaacagaaaaagtaaccaacaaaatctt
ggcacaattaagtcctccaacctgtgtactgagatcattgagtataccagtccttctgaa
actgctgtatgcaacctagcttcaattgccttaccacgttttgtgagggaaaagggtgtt
cctatagagtcccatccagctaagcttgttggtagcagtgggtcaaaaaatagatacttc
gactttgataaattagcagagattacttcgactgttacatacaatctcaacaaaataatt
gatattagctattatcccattgagagtgcaaggaggtcaaatatgaggcacaggccaatt
gggataggcgttcaaggattggcggatgcttttattttacttggaatgccattcgattca
ccagaggcccagcagttaaacaaggatatttttgaaactatttactatcatgctttaaaa
gcttctgctgatcttgctgcaaaagaaggtccttatgaaacatatgctgggagccctgtc
agcaagggcattcttcaacctgatatgtggaatgtagtgccatcagacagatggaactgg
tcagcaataagggaggtgatttctcaagttggattgaggaactctcttcttgttgctcct
atgcccactgcttccactagccaaattcttggcaacaatgagtgctttgaaccgtacaca
tcaaatatatacagtcgaagagttttaagtggtgagtttgtcatagtaaacaagcatctt
ctccatgatctgactgagataggtgtctggtctcctattctaaaaaacaagataatctat
gaggatggttctgtccaaaaggttatcgaggtcccagatgatctaaaagcagtttacaag
actgtttgggaaatcaagcagaaaactattgttgacatggctgctgatcgtggctgctat
attgatcagagccagagcctcaatattcacatggatcaaccaaactttgggaagctaact
tcattgcacttccatgcttggtcgaagggccttaaaacagggatgtattacctaagaacg
cgcgctgcggcagatgcaattaagtttacagtagatactactctcctcaaggataagcaa
caaacttcagaggaagaggatgtccaggctaaaatggcccaggtggtctgttccttgaac
aaccgggatgagtgcttggcatgcggaagttag

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