Panicum virgatum (switchgrass): 120645543
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Entry
120645543 CDS
T07260
Name
(RefSeq) PAP-specific phosphatase HAL2-like isoform X1
KO
K01082
3'(2'), 5'-bisphosphate nucleotidase [EC:
3.1.3.7
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00920
Sulfur metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
120645543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120645543
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
120645543
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
120645543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Inositol_P
Motif
Other DBs
NCBI-GeneID:
120645543
NCBI-ProteinID:
XP_039778260
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All DBs
Position
1K:complement(54975094..54978026)
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AA seq
485 aa
AA seq
DB search
MGSLRLTGWASAQRGFPAAAAAAPEWGVRRRPRRCCHGVPLPRPRCAPSPAPAVASSLGV
GAAGHLRDGAEREWLWDCRGGAGGGARDYTREMEVAVRVVQVACTLCQRVQDALLHPGAD
AGGRVHSKLDRSPVTVAAVRASIFAYGDILLCSFMPDWGVQAIVSWLLSNSFHDENISIV
AEEDDETLSSSNGAALLESVVEAVNGCLVEAPKYGLRSPEKELGAHDVIQAIRKCSSAGG
PKGRFWVLDPVDGTLGFVRGDQYAIALALIEDGEVILGVLGCPNYPMKKEWLNYHQKYYR
LMSKVAPPPLGSWHKGCVMYAQKGCGQAWMQPLVHDFGKLDWAHPREIQVSSISDPMSAT
FCEPVEKANSSHSFTAGLAHSVGLRTQPLRVYSMVKYAAIARGDAEIFMKFARTGYKEKI
WDHAAGVVIIQEAGGVVTDAGGRQLDFSRGIYLEGLDRGIIACSGALLHQRILDAVDASW
NSSTL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcctccgcctcaccggctgggcgtccgcgcagcggggcttcccagccgcagcc
gccgccgcgccggagtggggcgtgcgccgccgcccccgccgctgttgccacggggtgccg
ctgccgcgcccgcgctgcgccccgtcgccggctccggcggtggcgtcctctctcggcgtc
ggcgccgcggggcacctccgggacggggcggagcgcgagtggctgtgggactgccgcggc
ggcgccgggggcggggccagggattacaccagggagatggaggtggcggtgcgggtcgtg
caggtggcctgcaccctgtgccagcgcgtccaggacgcgctcctccaccccggcgccgac
gcaggcggccgcgtccattccaagctcgaccgctcccccgtcacagtcgctgcagttcgt
gcctctatatttgcatatggtgatattttgctgtgttccttcatgccagattggggtgtt
caagcgatagtaagctggttgctttccaattcctttcatgatgagaacatatcgattgtc
gctgaagaagatgatgaaacactatctagtagcaacggtgcggctttgcttgaatctgtt
gttgaggctgtcaatggttgcctggttgaagctccaaagtatgggctgagatccccagag
aaagagctcggagctcatgatgttattcaagccatacggaaatgcagctctgccggaggt
ccaaaaggaagattttgggtgcttgatcctgtcgatggcacccttggttttgttcgaggg
gatcaatatgctatcgctctagccttgattgaagatggagaagttatacttggtgttctt
gggtgcccaaattatccaatgaaaaaggagtggctcaattatcaccaaaagtactacaga
ctgatgtctaaggttgctcctcctccattggggtcctggcataagggttgtgtgatgtat
gctcagaaaggatgtggccaagcttggatgcagccactggttcatgactttggtaagctt
gattgggctcacccgagggagattcaagtatcgtccatcagtgatccaatgtcagcaaca
ttttgtgaacctgttgagaaagccaactcaagccattcctttacagcaggacttgctcat
agcgtaggattaaggactcaacctctgcgtgtgtacagcatggtgaagtatgctgcaata
gcacgaggtgatgcagagatatttatgaaatttgcaagaactggatataaggagaagata
tgggatcatgctgcaggggtggttatcattcaagaggctggtggagtggtcacagatgct
gggggccgccagttggacttctcaaggggcatttacttggaaggtttggatagaggcata
atagcatgttccggagcattgcttcatcagagaattttagatgctgttgatgcaagctgg
aactcgtcaacactatga
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