Panicum virgatum (switchgrass): 120645646
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Entry
120645646 CDS
T07260
Name
(RefSeq) clathrin interactor EPSIN 2-like
KO
K12471
epsin
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120645646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120645646
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120645646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ENTH
ANTH
Motif
Other DBs
NCBI-GeneID:
120645646
NCBI-ProteinID:
XP_039778353
LinkDB
All DBs
Position
1K:complement(55086345..55091923)
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AA seq
923 aa
AA seq
DB search
MKKAFNQTVRDIKREVNKNVLKVPRIEQKILDATSNEPWGPHGSLLADIAQATHNYHEYQ
MIMNIVWKRINDTGKNWRHVYKGLIVLDYLVAHGTERVIDDIREHAYQISTLADFQYIDS
SGRDQGSNVRRKSQSLVSLVNDKERIQEVRQKALATRDKYRSAFATSGLGGYSGGYDNDH
FEGSYGSRYDNRNGNGREREYGYRDDDRYGGPGDTPNREGDRYSRDSNERYGRDYREDEY
KGSHSNHEYAEGTGRRSYGRERDSYGDDEAYSSRGRGSNADGPTQDERPIERKLSNQQIA
SPPPNYEDVTRDGQDNLHADRNGGSIPAAVPKVPSPSVPATSVPAEQVNGVHDNTVEDVP
APPTAHAEPNGFDEFDPRGSVSDSSPPVNPVPVVNSLEMDLFGSDPISSLALVSVPQPTT
TSNVEPPANSGFETNNFMGMPPTSSGFGEIDASNPFGDPTPFKAVHDESPAVPQTNAAPA
GSSQSTGPGADANPFQPASASSFGFGDTLGDLTFVSNTAPEQQDIFANTTSFPSEVSAVN
PSAVLQQPVSTNLPSQAPQPAVAGPSPVTHAAPTAFAPPQAPQAAHAFAYSQAPHPAAAN
QSQIPQAVSTSYAPSQVPQTVAPNLPSGQSNFFMQPAPGAGFDSQFGVPTQSGAPPYIPP
QTSQFTAPANQQPSQPSFLPQTGTSAPQPALISRGASQPLGVPNSVPPASSFPLQSSSSA
PPETLISALQVSQTEPVKKFEPKSKLWSDTLSRGLVNLDISGPKANPHSDIGVDFDSINR
KEKRQEKKINQAPVVSTITMGKAMGAGSGIGRAGAGAMASPPNPMGAGRPMGMGMGIGAG
YGGGMGMNRPMGMGMGMGMGMNQQQMGMGMGMNQQPMGGMNMGMNQGMPMRPPMGMGPGG
MPGAGYNQMGAAYGGQQPYGGYR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcgttcaatcaaacggttcgggacataaaaagagaggtgaataagaatgtc
ctcaaggttcccagaatagaacaaaagattctcgacgccacaagcaatgagccatggggc
ccacatggatctctcctggcagacattgctcaagcaactcataactatcatgagtatcag
atgatcatgaatattgtgtggaagaggatcaatgacactggtaaaaattggcggcatgtt
tacaagggattgattgtcttggattacctggttgcgcatggtaccgagcgagttattgat
gacataagagagcatgcttatcagatatcgacacttgctgacttccagtacattgattct
tctgggagagatcaaggcagcaatgtgcggaggaaatcccagagccttgttagtttagtt
aacgataaagaaagaatacaggaagttaggcagaaagcgcttgcgaccagggacaagtac
cggagtgcatttgccaccagtggcctaggtggatacagtggtggttatgacaatgatcat
tttgagggcagctacggcagtagatatgataacagaaatggaaatgggagggaaagagaa
tatggatacagggacgatgacagatatggtggtcctggagatacacccaatcgggaagga
gatcgttattccagagattctaatgaacgctatggcagagattatagagaagatgagtac
aaaggaagtcacagcaaccatgaatatgctgaaggaacaggccgcaggagctatggtcgg
gaaagggattcatatggggatgatgaagcttattcatcccgtggccgtggcagcaacgcc
gatggtcctacccaggatgagaggcctatagaacgaaagctttctaaccagcagattgct
tcaccaccaccaaactacgaagatgttacaagagatggccaggataatcttcatgctgac
agaaatggaggaagtattcctgctgctgtaccaaaggtgccctctccttctgttcctgca
acaagtgttcccgcagaacaggtgaatggggttcacgataatactgtcgaagatgtacct
gcaccaccaactgctcacgctgagcctaatggatttgacgagtttgatccacgtggatct
gtatcagattcttcccctcctgtgaaccctgtgccagtggtgaatagcttggagatggat
ttatttggatcagatcctattagttcactggctttggtatccgtgcctcaaccaacaacc
acatcaaatgttgagccaccagcaaattcaggttttgagacaaataatttcatgggcatg
ccaccaacttcttccggatttggcgagattgatgcatcaaatccttttggggaccctact
ccattcaaggcggttcatgacgaaagtcctgcagttcctcagacaaatgctgctcctgct
ggttcttcccagtccactggacctggtgcagatgcaaatcctttccagcctgcttctgcc
tcaagctttggttttggagatacccttggtgatctcacttttgtatcaaacactgcacct
gagcagcaagatatttttgcaaacacaacctcctttccatcagaggtatcagctgtgaat
ccatccgcggttcttcaacaaccagtttctactaatttaccctctcaggcacctcagcct
gcagttgctggcccatcgcctgttactcatgctgctcccacagcatttgctcctcctcaa
gcaccccaggctgctcacgcgtttgcttattcacaagcacctcatcctgctgctgccaac
cagtctcaaattccccaggctgtgtccacttcatatgctccttctcaggtgcctcaaact
gtagcacccaatctgccatcagggcagtcaaacttctttatgcaaccagcaccaggggct
ggttttgatagccagtttggggttcctacacagagcggagctccaccctacattcctcca
cagacttctcagttcactgctccagcaaaccaacaaccatctcagccaagcttcctccca
caaactggaacatcagccccacagccagctttgatttctcggggagcatcccaacctctt
ggtgtgccaaattcagtgcctcctgcttccagcttcccattgcagtcaagttcatcagct
cccccagaaactctcatttcagctttgcaagttagtcagactgagccagtgaagaaattc
gagcccaagtctaaactgtggtctgatactctgagccgtggtctagtcaatctggacatt
tctggaccaaaagcgaaccctcattctgatattggagttgactttgattcaatcaatcgc
aaggagaaaaggcaagaaaagaaaataaaccaagcgcctgtggtgtcaaccatcaccatg
ggcaaagccatgggagctggttctggcattggtcgggctggtgcgggtgcaatggcatct
cctcccaacccaatgggtgctggcaggcccatgggcatgggtatgggtattggtgctggt
tatggtggcggaatggggatgaatcggccaatggggatgggaatgggaatgggaatggga
atgaaccaacaacaaatgggaatggggatggggatgaaccaacaaccaatgggaggaatg
aacatggggatgaaccaggggatgccgatgcggcctcctatgggaatgggtcctggtgga
atgcccggagctggctacaatcaaatgggtgcagcatacggtggtcagcagccatatgga
ggatacaggtga
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