Panicum virgatum (switchgrass): 120645667
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Entry
120645667 CDS
T07260
Name
(RefSeq) protein NPG1-like
KO
K21843
tetratricopeptide repeat protein 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120645667
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
120645667
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_1
TPR_14
ANAPC3
TPR_CcmH_CycH
ARM_TT21
TTC7_N
Motif
Other DBs
NCBI-GeneID:
120645667
NCBI-ProteinID:
XP_039778365
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All DBs
Position
8K:complement(36275936..36279494)
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AA seq
710 aa
AA seq
DB search
MAADPEDGSEVAPEEATSPAEVDVDPTPQEKVVALPLEGESLKASGSCTAAVGSESSSHP
EGLSLNYEEARALLGRLEFQKGNVEVALRVFDGIDLQAAIQQFQPSLSDKTPSKKGRTKS
EVPSSVPQNNPASLVLEAIYLKSLSLQKLGKSTEAANQCKSVLDSVESMFQNGTPDIEQK
LQETVNKSVELLPEAWKYAGSYQEALASYRRALLSPWNLDDECRSRVQKRFITFLLYGNI
DWSPPSMAQQIEGSFLPKNNVEEAILLLSIILRNWYQAKTHWDPSVMEHLTYALSLCCEP
LVLAKQLEEVLPGIYPRTERWCTLALCYYADGQRDIALNFLRKSLNKLENPNDILALLLA
AKVCSKECHLASEGVEYARRVIARAEPSNYHLKSVGLHILGSCLGKKSKVVSSDYQRSLL
QAETLKSLTESITLNRYNADLIFDMGVEYAEQRNMNSALRCAKEFIEATGGSVSKGWRLL
ALVLSAQQRFCEAEVAIDAALDETANWDQGSLLRVKAKLKVAQSSPMEAVEAYRTLLALV
QAQKSSTESTKGTPEIVDDRVSEFEIWQGLANLYSSLSYWRDAEICLQKARTLKSYSATI
LHAEGYMHQAREHTKDALAAYVNAFSTELEHVPSKVAIGALLAKQGPRFLPAARCFLSDA
LRVEPTNRMAWLYLGKVHRSDGRITDAADCFQAAVILEESDPVESFSSLL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacccagaagatggcagcgaggtggccccggaagaggccacatcgccagcg
gaggttgatgtggatccaaccccacaagaaaaggtggttgcgcttcctctcgagggtgag
tcgttgaaggcaagcggcagttgcactgcagctgttggctctgagtcttcatcacaccct
gagggactctcccttaattatgaggaagcaagagctctccttggaagactagaatttcag
aaaggaaatgtggaagttgctctccgtgtgtttgatggaatagacctccaagctgccatt
cagcagtttcagccatccctttctgataagacaccatcaaaaaaggggaggacaaaatct
gaagtacccagttctgtgccgcaaaacaatcctgctagccttgttttagaagccatttac
ttgaaatcactatcccttcaaaaactagggaaatctacagaagctgccaaccaatgcaaa
agcgtacttgattctgttgaaagtatgttccagaatggcactcctgatatcgagcaaaaa
ttacaggaaactgttaataaatctgttgaacttcttcccgaagcctggaaatatgccggc
tcctatcaggaagcattagcttcttaccggcgagctcttcttagtccatggaatcttgat
gatgaatgccgctccagggttcaaaagagatttatcacttttctgttgtacggcaatata
gattggagccctcccagtatggctcagcaaattgaaggttcttttcttccaaagaataat
gtggaagaggctattttacttttgtcgataatactgaggaattggtaccaagccaagacc
cattgggatccttctgtcatggaacatttgacttatgccttgtcactttgttgcgaacca
ttggttcttgcaaagcaacttgaagaggttttacctggaatatatcctcgtactgagagg
tggtgcaccctagcactttgctactatgcagatggccagagagatattgcactaaatttt
ttgaggaagtctttaaacaaacttgagaatccaaatgacatccttgccttattattagct
gctaaagtatgtagtaaggagtgccatttggcttcagagggtgttgaatatgcaaggaga
gtaattgcacgtgctgaaccatcaaattatcatctgaaaagcgtgggcctccatatcttg
gggagttgtcttggtaagaagtccaaggttgtttcatcagattaccaaagatctctactt
caggcagaaacattgaagtcacttacagagtcaatcactcttaaccgttacaatgcagac
ctaatatttgacatgggagttgaatatgctgagcaaagaaacatgaattctgcattgaga
tgtgcaaaggaatttattgaagcaactggtggatcagtgtccaaaggatggaggctgcta
gcattggttctttctgcacagcagagattttgtgaagcagaagtcgcaattgatgctgcc
ttagatgaaactgcaaattgggatcaaggatccttacttagggtaaaggctaagttgaag
gttgctcagtcatcaccgatggaagcagtggaagcataccgtactcttcttgctctagtt
caggcccaaaagagttccaccgaatctacaaagggtactccagagatagtagatgatagg
gtcagcgagtttgaaatctggcaaggtcttgctaatttgtactctagtctctcatactgg
agagatgctgagatatgtttgcagaaggcaagaaccctgaagtcatactccgctacaata
ctccatgcagaaggttacatgcatcaggcgcgcgagcatacaaaggatgcactggctgcc
tatgtaaatgcattctcaacagagcttgaacatgtgccatcgaaggtggccataggtgca
ctcctcgccaaacaagggcctaggtttctacctgcggcgagatgtttcctctcagatgcc
ctaagagtcgaacccacaaaccggatggcttggctttacttgggaaaagttcataggtca
gatgggaggataactgatgctgccgactgcttccaagcagcagtgatcctcgaggagtca
gatcccgtggaaagtttcagttcactcttgtga
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