Panicum virgatum (switchgrass): 120645740
Help
Entry
120645740 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120645740
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120645740
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120645740
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120645740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_6
RING_XB3-XBAT31
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
120645740
NCBI-ProteinID:
XP_039778425
LinkDB
All DBs
Position
8K:complement(41422201..41426050)
Genome browser
AA seq
198 aa
AA seq
DB search
LSPKSSVSYKQQHNKFASQLLAQTYSADACSICLEAFCESDPSALTSCKHEFHLQCILEW
CQRSSQCPMCWQPISMKDPTSQELLEAVECEKNIRTNQTRNTTIFHHPALGDFELQHVRF
TKLLNDTFLLALPMADDWTTTYCINEDGFPKVLYAATVRLGIPERPEYIGREFMEHGTES
CEVTIQIGASDKYLEMQP
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ctttctccaaaatcatcagtgtcatataagcaacagcacaacaaatttgcaagccaactc
ctagcacaaacgtattcagcagatgcatgtagcatttgccttgaggctttctgtgagagt
gacccttctgcattgaccagctgcaaacatgagttccatctccaatgcattctggaatgg
tgtcagagaagttcacagtgcccaatgtgttggcagccaattagtatgaaggatcctacc
agccaggagctgcttgaggcagtagaatgcgagaagaacataagaaccaatcaaactcga
aacacaactatattccatcatcctgctcttggggattttgagctgcagcatgtacgtttt
acgaaactacttaatgatacgtttcttttagccttaccgatggctgatgactggaccacc
acctactgcatcaacgaagatggattccccaaggtgctttatgctgccactgtgcgactt
ggtattccggaacgtccggagtacatcggtcgtgagttcatggagcatggcaccgaaagc
tgtgaggtcaccatccagattggcgccagtgacaagtacttggagatgcaaccatga
DBGET
integrated database retrieval system
