Panicum virgatum (switchgrass): 120645777
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Entry
120645777 CDS
T07260
Name
(RefSeq) scarecrow-like protein 34
KO
K27753
GRAS family protein LISCL
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120645777
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120645777
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Ortholog
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GFIT
Motif
Pfam:
GRAS
MRP-S31
Prohormone-like_C
Glyco_hydro_101
Motif
Other DBs
NCBI-GeneID:
120645777
NCBI-ProteinID:
XP_039778451
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All DBs
Position
8K:complement(42918529..42921101)
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AA seq
706 aa
AA seq
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MFAPSSVCRLSNEPRKLTHPPHPQILVQSSSPVQPHTAAMAEGEGLLADPEPFSPSVFLD
LPPTPRPDGTEDPVSSDDLILPFISRMLMEEDIGDQFFYQYPEHPALLQAQQPFADILSD
AATNSTSSGSTATLSPSSPDDPIQLPHLLQPAPHATAGLEQHDGVQSWALLDDADEEGRR
KKSSDGDQDQTVLASAFFSGNNKDILNQAFLKGKEEANKLLPTNSALLVDQVKETNGGGR
KKTHNWDDYDDLEAETCRKSKLMVPEPEETGEVVDEMIVNAYDLCLKEMESLRITMGSSE
DTKKKKEKKKKGMKGKGKGSRSRNEAVDLSTLLIHCAQAVATDNRRGAAELLRQIRQHSS
PRGDATQRLAHVFAEGLEARLAGSGSQLYASTVAERVPVTEYLKACWLYLAACCFEMVAF
KFSIAAICNAAAGRKKLHIVDYGVSYGFQWPTLLRCLANREGGPPEVRITGIDLPQPGFR
PAAQIEATGRRLSNCARQFGVAFKFRGIAAKWETIGADDLDIDRDEVLIVNSVRFQNLMD
EGADIDSPSPRDIVLGNIRKMRPDMFILFTTNVLSGASFFLTRFREALFYYSAMFDMLDA
TAPRDSHQRLLVERGLFRPCALNAVACEGSDRVERPETYKQWQARSQRAGLKQLPLDPDI
VRDVREMVREQYHKDFAIDVDHHWLLEGWKGRVLYAMSTWVADDAM
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccccatcttccgtttgtagattgtcaaatgaaccaagaaagcttacccaccca
ccccatccacaaatactagtacagagctcatcgccggtccaaccacacacagcagccatg
gcggagggcgagggcctcttggctgatcccgagcccttctcgccgtccgtcttcctcgac
ctgcctccgacgccccgccccgatggaaccgaggacccggtctcctccgacgacctcatc
ctccctttcatctcgcggatgctcatggaggaggacatcggcgaccagttcttctaccag
taccccgagcacccagcgctactccaagctcagcagcccttcgctgacatcctctccgac
gccgccaccaacagcacctcctctggctccaccgcgaccctctcgccatcgtcccctgac
gacccgatccagcttccgcatctcctccagcccgcgccgcatgccaccgcggggctggag
cagcacgacggcgtgcagagttgggccttgttggatgatgccgatgaggaggggcggagg
aagaagagcagcgacggtgaccaagaccaaaccgtgctggcctcggctttcttcagcggc
aacaacaaggacattctgaaccaggcgttcctcaagggcaaggaggaggccaacaagttg
ttgcccaccaacagcgcccttctcgtcgaccaagtgaaggagaccaatggcggcggccgc
aagaagacgcataactgggatgactatgatgacttggaggccgagacgtgcaggaagagc
aagctgatggtgcccgagcccgaggaaaccggcgaggttgtcgatgaaatgatcgtcaac
gcatatgacttgtgcctcaaagaaatggagtccctgcgtatcaccatgggcagcagcgag
gacaccaagaagaagaaggagaagaagaagaagggcatgaagggcaaagggaagggaagc
cggagcagaaacgaggcggtggacctgagcaccttgctcatccactgcgcacaggccgtg
gccacggacaaccgccggggcgccgccgagctgctccggcagatcaggcagcactcctcg
ccgaggggagacgccacgcagaggctggcgcatgttttcgcggaggggctggaggcgcgg
ctggcagggtcagggagccagctgtacgcgtcgacagtggcggagcgcgtcccggtcacg
gagtacctcaaggcctgctggctgtacctggcagcctgctgcttcgagatggtggcattc
aagttctccatcgcggccatctgcaacgccgccgcggggaggaagaagctgcacattgtg
gattacggcgtgagctacggcttccagtggccaactctgctgcgctgtttggcgaaccgg
gagggcgggccgccggaggtgaggatcaccggcatcgacctcccccagcccggcttccgc
ccagccgctcagatcgaggcgaccgggcgccgcctcagcaactgcgctcgtcagtttgga
gtggcattcaagttccgtggcatcgcagccaagtgggagaccatcggtgcggacgatctc
gacatcgaccgcgatgaggtgctcatcgtcaacagtgtccgctttcagaatttgatggac
gagggggccgacatcgacagcccgagccccagggacatcgtcctcggcaacatccggaag
atgcggccggacatgttcatcctcttcacgacgaacgtcttgtccggcgcctccttcttt
ctgacacggttccgcgaggcactgttctactactctgccatgtttgacatgctggacgcc
acagccccgcgggacagccaccagcgcctcctggttgagcggggcctcttcaggccgtgt
gccctcaacgccgtcgcctgcgagggctccgacagggtggagcgccccgagacgtacaag
cagtggcaggcgaggagccagagagctgggctgaagcagctgccgttggatccggacatt
gtcagggacgtgagggagatggtcagggagcagtaccacaaggatttcgccattgatgtg
gatcaccactggctcctggaggggtggaaggggcgcgtactctatgccatgtccacatgg
gttgcagatgatgctatgtaa
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