Panicum virgatum (switchgrass): 120645857
Help
Entry
120645857 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120645857
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120645857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BACK_BPM_SPOP
MATH_2
BTB
TRAF-mep_MATH
BACK
Motif
Other DBs
NCBI-GeneID:
120645857
NCBI-ProteinID:
XP_039778517
LinkDB
All DBs
Position
8K:48128113..48129174
Genome browser
AA seq
345 aa
AA seq
DB search
MKSASAIVAEAVTGSHVLNIEGYSRTKGLGGGEFIQSSTFDVGGHRWFIRYYPDGYGSDN
AGWISFYLQLQHSDATSVKASLKLSLLDEMGEPVPSHCTNWGAIATLSTRQQWGCKRFIE
KKTLEESAYLKDNCFAIRFDIIVSKEFRAEDTTQFVAVPPSDLHQHLGRLLSSGAESDVT
FRVGGETFDAHRLVLAARSPVFTAELFGPMREERTTGRPIQIDDMEPGVFGAMLHYIYTD
SLPEAADTGDAAVMAQHVLVAADRYGLERLKLICEDKLCSYISTDTAATTLALAEQHGCR
GLKKACFSFLRSPGNLKAIIGSDGFQHLTSSCPSLLNELLANVAP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgcgtcggccattgtggcggaggccgtgaccgggtcacacgtgctcaacatc
gaggggtactcccggaccaagggactcggcggtggcgagttcatccaatccagcacattc
gatgtgggaggccatcggtggtttatcagatactacccggatggttacggctcggataac
gctggctggatatcgttctatctgcaactccaacattcagatgctaccagcgtgaaggca
agcttaaaattaagtctactcgacgagatgggagaaccagtcccatcgcattgcactaat
tggggcgctatagccacgctctcgacacgccaacaatggggatgtaaaaggttcatcgag
aagaagactctagaggaatcagcttatctgaaagataactgttttgcaatcaggttcgat
atcatcgtctccaaggagttccgagcagaggacaccacacagttcgtcgccgtgccgccg
tcggacctgcaccagcacctcggccgtctcctctcgtccggcgcagaatccgacgtcacg
ttccgggtcggcggggagaccttcgacgcgcaccggctcgtgctcgccgcccggtccccg
gtgttcacggcggagctcttcggcccgatgagggaggagcgcacgacgggccgccccatc
cagatcgacgacatggagccaggggtgttcggcgccatgctccactacatctacaccgac
tcgctgccggaggcggcggacactggcgacgcggcagtcatggcgcagcatgtgctcgtc
gcggcggacaggtacggcctggagaggctgaagctcatctgcgaggacaagctctgcagc
tacatcagcactgatacggcggcgactacgctggcccttgccgagcagcatggctgcaga
gggctcaagaaagcgtgcttcagttttctcaggtctccgggcaatctgaaggcgatcatc
ggtagcgatgggtttcagcatctgacgagcagctgcccgtctcttctcaacgagctgctc
gccaacgttgctccgtga
DBGET
integrated database retrieval system
