Panicum virgatum (switchgrass): 120645858
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Entry
120645858 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120645858
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120645858
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GFIT
Motif
Pfam:
BACK_BPM_SPOP
BTB
MATH_2
P_proprotein
MATH
Motif
Other DBs
NCBI-GeneID:
120645858
NCBI-ProteinID:
XP_039778518
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Position
8K:48171040..48171996
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AA seq
318 aa
AA seq
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MPSSPGAPAVVAAATGRGSASTITTATETGSHELTVPPARRSWRVQPEQHPRGNVRVQLA
GPDGTRRAVLHQACSKRISFSVPKSRSCGWTKFIEHEALEESSHLENDTFQVSCHVTVHE
ICTEESSAPHFLPAPPMDVHRLLGDLLDSKVGADVKIKVGKETFAAHRSTLAARSPVFRA
ELFGWMKERKAGQVRIDDMEPRVFRAMLRFIYTDSLPDMDEGDRRVMAQHLLVAAARYRL
ERLKMICEDMMCNFINTDTAATTLVLAEQHGCRRLKERCINFLKCPGNTVAVMATDGFDH
LMTSFPSLIKDLLAKVSP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcccccggtgcccctgccgtcgtcgccgccgccaccggccgcggcagcgcg
tcgaccatcaccaccgccacggagaccggctcgcacgagctcactgttcctcctgctcga
cgatcatggagggtccagccggagcagcatcctcgaggcaacgttcgggttcagcttgct
ggaccagacgggacacgccgtgccgtcctacaccaggcttgcagcaagcgaattagcttc
tccgtccccaaatcgcgctcctgcggttggacaaagttcatcgagcacgaggcgttggag
gagtcgtcgcacctcgagaacgacaccttccaagtcagctgccacgtcaccgtccacgag
atctgcacagaggagtcaagtgcgccgcacttccttccagcgccgccgatggacgtacac
cggctcctcggcgacctcctcgacagcaaggtgggagccgatgtcaagatcaaggtcggg
aaggagacgttcgcggcgcaccggagcaccctcgccgcccgttccccggtgttccgggcc
gagctcttcggctggatgaaggagaggaaggccggtcaggtccggatcgacgacatggag
ccgagggtgtttcgggccatgctccggttcatctacaccgactccttgcccgacatggac
gaaggtgacaggagggtgatggcccagcatctgctcgtcgcggcggcccggtaccgattg
gagaggctcaagatgatctgcgaggacatgatgtgcaacttcatcaacaccgacaccgcg
gcgactactttggtactggctgagcagcacggctgccgtcgtctcaaggaacggtgcatc
aatttcctcaagtgtcctggcaatacagtggcagtcatggcgacggatggctttgaccat
ctaatgactagttttccctctcttatcaaggacctcctggccaaggtttctccttga
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