Panicum virgatum (switchgrass): 120645866
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Entry
120645866 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120645866
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120645866
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GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
Nramp
Motif
Other DBs
NCBI-GeneID:
120645866
NCBI-ProteinID:
XP_039778524
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Position
8K:48326082..48327071
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AA seq
329 aa
AA seq
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MATSPASAAATAGRVTTVVTETMAGWCVLMTVDGYSKLMEADECIESDWFCAGCRRWYMY
IIGGAKEAAAADLATFVIGLESPDDEVKVRYKLTLLNRAGEIISATQSFATLSSSVNSTE
MGAMDTQYLLEDSFQIRCEVAVVTEITAARPPDLPRHLGGLLASQVGADATFQVGGEVFA
AHRCVLAARSGVFMAELFGPGKGTSAAAAAPVRIDGVEPRVFRALLHFIYTDSLPEVEVG
EGGGDDDEVAMARGLLAAADRFGVESLKLICGDVLCNSIDARTAVDLLELADNHGCPSLK
AACVKVIKDLLAKVSPSSSPIRKRQKKLN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccacctccccagcatccgccgccgccaccgctggccgcgtgaccaccgtcgttacc
gagaccatggccgggtggtgcgtgctgatgacggtcgacgggtactccaaactcatggag
gccgacgagtgcatcgaatccgactggttctgcgccggatgccgccgttggtacatgtac
ataatcggcggagcgaaggaagccgccgccgccgacttggcgaccttcgtcattggtctc
gagagcccagatgatgaagtgaaggtgcggtacaagctcaccctgctcaaccgtgccgga
gagataatctccgccacccaaagcttcgctaccctctcgagctcagttaactccactgag
atgggggcgatggacacccagtatctcctcgaggacagcttccagatcaggtgcgaagtc
gccgtcgtcacggagatcaccgcggcgcggccgccggacctgccccggcacctcggcggc
ctcctggcgagccaggtcggggcggacgcgacgttccaggtcggcggcgaggtcttcgcc
gcgcaccggtgcgtgctcgccgcccgctccggggtcttcatggccgagctcttcggcccg
gggaagggaacgagcgccgccgcggcggcccccgtgcggatcgacggcgtggagccgagg
gtgttccgggccttgctgcacttcatctacaccgactcccttcctgaggttgaggtaggc
gagggcggcggcgacgacgacgaggtcgccatggctcggggtctgctcgcggcggcggac
aggttcggcgtggagagcctcaagctgatctgcggcgacgtgctgtgcaactccatcgac
gcgcgcacggccgtggacttgctggagctagcggacaaccatggctgcccgagtctcaag
gcggcgtgtgtcaaggtcatcaaggacctgctcgccaaggtttcgccttcatcgtctcca
atcaggaagaggcaaaagaaacttaattag
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