Panicum virgatum (switchgrass): 120645964
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Entry
120645964 CDS
T07260
Name
(RefSeq) scarecrow-like protein 33
KO
K27753
GRAS family protein LISCL
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120645964
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120645964
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
120645964
NCBI-ProteinID:
XP_039778598
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Position
8K:53231079..53232701
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AA seq
488 aa
AA seq
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MLLPKQNKFRGDVQANQMLRESNNHTGDKKRNDRDNHMEEQIRTSKAAKRINDPEENCAN
EMLDELMLRAYETCIKGMEELRVSMDNKMEKENRKRFNKAVKDNVVDIRTLLISCAQAMA
TNNHMGACELLKKIKKHASATGDVTQRVAQCFTKGLEARLVGTGSQLWQLLMAERLSIVE
FLKAYRLYFAACCFNKVALSFSTMTIFHAMVGKRKLHVVDYGMHFGFQWAGLLRLLASRE
GDLPEVRITAIGPPRLKSCPAERIEELGCRLSKYAHEFGLASFKFHTIMKKWEDVRIEDL
NTDADEVLVVNDLFSFNTLMDESVFFDRQSPRDTVLNNINKMRPDVFIQSVLNCSCGSSF
LTRFREVMSYYIAIFDMLDATTPRESESRVVLEQFVLGRPALNIIACEGPDLVERPEKYR
QWQVRNQRAGLRQLPLKSRIVEVVKDTVRKHHHKDFLICEDGQWLLQGWMGRVLFAHSTW
VAQDTSSQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgcccaagcaaaacaagtttagaggggatgtgcaggcaaatcagatgctccgg
gaaagcaacaatcatactggggacaagaagaggaatgatagggataaccatatggaggag
caaataaggaccagcaaagctgcaaagaggatcaatgatccagaggagaattgtgccaat
gagatgcttgatgaattgatgctgcgtgcctacgagacatgcatcaagggcatggaggag
ctgcgtgtctccatggacaacaagatggagaaggaaaacaggaagagatttaacaaagcg
gtaaaggacaatgtggtggacatacgcacattgctgatctcttgtgcgcaagcaatggca
acaaataaccatatgggggcatgtgagctattgaagaaaatcaagaaacatgcatcggca
acaggggatgtcacgcaacgggtagctcagtgtttcaccaaggggctagaggcacggcta
gtgggcacaggtagccagctttggcagttgctcatggcagagcgtctctctatcgtggag
ttcctcaaggcctacagactttacttcgcagcctgctgcttcaacaaggtggcgctcagt
ttttcaacgatgacaatctttcatgccatggtgggtaagaggaagctacatgttgtggat
tacggtatgcattttggcttccaatgggctggcttgctccgcttactggcgagtagagaa
ggtgacctaccagaggtgaggatcaccgccataggcccccccaggctcaagtcctgtcca
gcagagcggattgaggagctagggtgccggctcagcaaatatgctcatgagttcggcttg
gcttctttcaagttccacacaatcatgaaaaagtgggaggatgttcgcattgaagacttg
aacaccgacgcagatgaggtgcttgtcgtgaatgacctcttcagtttcaacaccttgatg
gacgagagtgtattcttcgacagacaaagccctagggataccgtccttaataatatcaat
aagatgaggccggacgtgttcatccagagcgttttgaattgttcatgtggttcttcattc
ctgacaaggtttcgagaggtgatgtcctattacatcgcaatatttgacatgctagatgca
accacgccaagggagagcgaatctcgagtggtgctggagcagttcgtgcttggtcgtcct
gcattgaacatcattgcctgtgagggcccggacttggtggaacgcccagagaagtatagg
cagtggcaggtgagaaaccaacgggcagggctgaggcagctgcctttgaaatcaagaatt
gtagaggtagtgaaagatacagtccggaagcaccaccacaaggactttttgatctgtgag
gatggccaatggcttctacaagggtggatggggcgtgtcctctttgcacactcgacatgg
gtagcccaagacacctcttctcaatga
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