Panicum virgatum (switchgrass): 120645971
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Entry
120645971 CDS
T07260
Name
(RefSeq) cycloartenol synthase
KO
K01853
cycloartenol synthase [EC:
5.4.99.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00100
Steroid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120645971
Enzymes [BR:
pvir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.8 cycloartenol synthase
120645971
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Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Motif
Other DBs
NCBI-GeneID:
120645971
NCBI-ProteinID:
XP_039778628
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Position
1K:complement(3524315..3533010)
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AA seq
757 aa
AA seq
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MWRLKIAEGGGDPWLRTKNGHVGRQVWEFDAAAEPDPAVDAARRAFVERKHDLKHSADLL
MRLQFAKENPLNLDLPAIKLDEHEDVTEEAVATTLKRAISRFSTLQAHDGHWPGDYGGPM
FLMPGLIITLYVTGALNTVMSSEHQKEIRRYLYNHQNEDGGWGLHIEGPSTMFGSALTYV
ILRLLGEGPDSGDGAMEKGRNWILDHGGATFITSWGKFWLSVIGVFEWSGNNPVPPEVWL
LPYILPFHPGRMWCHCRMVYLPMCYIYGKRFVGRITPLVLELRKELFKDPYSEIDWDKAR
NQCAKEDLYYPHPFVQDVLWATLHKFVEPVMLNWPGSKLREKALETVTEHVHYEDENTRY
ICIGPVNKVLNMLACWIEDPNSEAFKLHIPRVYDYLWLAEDGMKMQGYNGSQLWDTAFTV
QAIVATNLIEEFGPTLKLAHDYIKNTQVRDDCPGNLDDWYRHTSKGAWPFSTADHGWPIS
DCTAEGLKASLLLSKISPEIVGESLEANRFYDAVSCLMSYMNDNGGFATYELTRSYAWLE
LINPAETFGDIVIDYPYVECTSAALQALTSFRKLYPGHRKKEVDNCISKAASFIESIQKS
DGSWYGSWAVCFTYGTWFGVKGLVAAGRTFENSPAIRQACEFLLSKELPSGGWGESYLSS
QDQVYTNLKGKRAHAVNTGWAMLALIGAGQAERDPTPLHRAARVLINLQSEDGEFPQQEI
IGVFNKNCMISYSQYRNIFPIWALGEYRCLVLGAGKQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggctgaagatcgcggaggggggcggggacccctggctgcgcacgaagaacggc
cacgtcggccgccaggtctgggagttcgacgccgccgccgagcccgaccccgccgtcgac
gccgcgcgccgggccttcgtcgagcggaagcacgacctcaagcacagcgccgacctcctc
atgcgcctccagttcgctaaagaaaatcctcttaacctggaccttccagcaatcaaactg
gacgagcatgaagatgttacggaggaagccgtagcaactactttgaaaagggcaatcagc
cgtttttctactctccaggcacatgatggacactggcctggggactatggtggccctatg
ttccttatgccaggcttgatcattacattgtatgtgactggagcactaaacactgtcatg
tcatcagaacaccagaaagagatccgccgatatctttataatcatcagaatgaagatggc
ggctggggcttgcatatagagggtccaagcaccatgttcggctcagcactgacgtatgtt
attttgagattgcttggagagggaccggatagtggagatggagccatggagaaaggtcga
aactggattttagaccatggtggagcaacatttataacatcatggggaaagttttggctc
tcggtaattggtgtgttcgaatggtctggtaacaaccctgtgccaccagaagtatggctg
ctaccatatatcctgccatttcatccagggaggatgtggtgtcattgccgaatggtgtat
ttgccaatgtgttacatttacgggaagaggtttgtcggccgaatcacgccacttgtgttg
gaattaagaaaggaactcttcaaagacccttacagcgagattgattgggacaaggcccgc
aatcaatgtgctaaggaagatctgtactatccgcacccattcgttcaagatgtcttatgg
gctacgctccataaatttgttgaaccagttatgttgaattggcctgggagcaaattgaga
gagaaagctctggaaactgtcacggagcacgtccactatgaagatgagaacactcggtac
atttgcattggtcctgtaaacaaggtattaaatatgcttgcttgctggattgaagatcca
aactcagaggcattcaagctccacattccgcgagtctatgattacttgtggcttgctgaa
gatggcatgaagatgcagggttataatggcagccagctttgggatacagctttcacagtt
caagccattgtggctaccaaccttattgaagagtttggtcccacccttaaactagcacat
gactacattaagaatacacaggttcgtgacgactgccctggaaatctggatgactggtac
cgccacacatctaaaggtgcatggccattctctactgccgatcatggttggcctatatca
gattgcactgcagaaggactgaaggcctcattattgttatcaaagatatctcctgaaatt
gttggcgaatcgctggaagctaatagattttatgatgctgtcagctgtctgatgtcttat
atgaatgataatggtggttttgcgacatatgaactcacaaggtcttatgcctggctggag
cttattaatcctgctgagacctttggtgacattgtgattgattacccgtatgttgaatgc
acatcagcagcacttcaggccctgacatcattcagaaagctctacccggggcaccgcaag
aaagaggttgacaactgtatcagcaaagctgctagtttcatcgagagtattcagaaaagc
gacggctcatggtatggctcttgggctgtttgtttcacctacggcacttggttcggtgtg
aagggattagttgctgctggtaggacatttgagaacagtcctgcaatcagacaggcgtgc
gaatttctgttatcaaaagagcttccttctggtggttggggagaaagctatttgtcgtct
caagaccaagtttacaccaatctcaaaggcaagcgggctcatgctgtgaacactggttgg
gccatgctggcactcattggcgcaggacaggctgagagagatccaacacctctacaccga
gcagcgagggttttgatcaacttgcaatcagaggacggagaatttcctcagcaagagatc
attggagtcttcaacaagaactgcatgatcagttactcgcagtacaggaacatcttccca
atttgggctctgggagagtaccggtgcctagtcctgggcgctggcaagcagtag
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