Panicum virgatum (switchgrass): 120646009
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Entry
120646009 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120646009
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120646009
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120646009
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120646009
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120646009
NCBI-ProteinID:
XP_039778641
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Position
8K:complement(1555576..1561837)
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AA seq
650 aa
AA seq
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MNMKGHQQHSSPLLLPPNKRRCTALAAAVPALVVCSILLPLVFLLGLHRPGYGSEEHAAV
VISTKLAGVGARNKQHLENGGAMKHKLLKDVSKKKTSGSNGILVEKSTRSKSKAKLKGAF
SLVELNNDTFESIGPHMLKRYQRKDLSGRSKESDTVLQQDTVVNGKQNRGQETVHEGNPK
SCEHEYGSYCLWSTEHREVMKDAIVKRLKDQLFIARAHYPSIAKIKQRERFTRELKQSIQ
EHERMLSDTITDADLPTVFAKKLEKMEHTIERAKSCEVGCSNVERKLRQLLDITEDEAYF
HTRQSAILYHLGVQTMPKTHHCLNMRLTLEYFKSRSIRTDQQNRQKLESPAFQHYVIFSR
NVLAVSTTINSTVLNCQDSGSIVFHLFTDAQNFYAMKHWFERNSYSEATVHVTNIEDHLK
LPKHAEMQQLLPSEEFRVTIRNYSEPSLRQMKTEYISVFGHSHFLLPDLLPGLNRVVVLD
DDLIVQKDLSSLWNLNMDGKVIGAVQFCGVKLGQLRSYISEHSFNSDACVWLSGLNVIEL
EKWRDLHVTSLYDQSLQKLQKESLLSKRLKALPVSMLAFQDLIYPLEDSWVQSGLGHDYG
ISKDHIEKAATLHYNGVMKPWLDLGIHNYKSYWRKYMTTGEIFMRECNIH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaaggggcaccagcagcattcctctcccctgttgctgccgcccaataagcgc
cgctgcaccgccctcgccgccgccgtgccggcgctcgtcgtctgctccatcctgctcccg
ctcgtcttcctcctcggcctccatcgccctggctatggatcggaggagcacgccgcggtt
gtcatcagcaccaagttggccggtgtcggggcgcgtaacaagcagcatctggagaatggg
ggcgccatgaagcacaagctgctcaaggatgtttccaaaaagaagacatctggatctaac
gggatcctggttgagaaatctactagatccaaatcaaaagcaaagctcaaaggtgctttc
tctttagttgagctaaataatgacaccttcgaaagtataggacctcatatgctgaaaaga
tatcaaaggaaggacctgtccgggagatcaaaggaatctgacaccgttttgcaacaggat
actgttgttaacggcaaacagaaccgtggtcaagagacagtgcatgaggggaatcccaag
tcctgtgaacatgaatatggaagttactgcctctggtctactgagcatagggaagttatg
aaagatgctattgtgaagaggcttaaggatcaactttttattgcaagggctcattatcct
agtattgcaaaaataaagcagcgcgaaagatttacccgtgaactgaagcaaagcattcaa
gaacatgaacgcatgctaagtgacaccatcacagatgctgatctgccaacagtttttgca
aagaagctagagaaaatggagcacacgattgagagagccaagtcttgtgaagtaggatgc
tctaatgttgaacggaaacttaggcagctacttgatataactgaagatgaagcttatttc
catacaagacagagtgcaattctatatcatcttggtgtccagactatgccaaaaactcat
cattgcttgaacatgagattaacattagaatatttcaaatctagatcaattcgcactgac
caacaaaataggcagaagcttgaaagtcctgccttccagcactacgtaatattttccaga
aacgtacttgcagtttcaaccactattaattcaacagttttaaattgccaggattctggc
agcattgttttccatttgttcactgatgcgcaaaatttttatgcgatgaagcattggttt
gagagaaattcatactcggaggctactgttcatgtaactaacattgaggatcatctgaaa
ctcccaaagcatgcagagatgcaacaattattgccttcagaggaattccgtgtcacaatt
cgtaattattctgaaccttccctgaggcagatgaaaactgagtacatatctgtttttggc
cattcacatttcctgttgcctgaccttcttcctggtttgaatagagtagttgttctggat
gatgatttgattgtccagaaagatttgtcatctctgtggaacctcaatatggatggcaaa
gtgattggtgctgtccagttctgtggagttaaattaggacagctaagatcttatatttct
gaacatagtttcaactccgatgcatgtgtgtggttgtctggtctgaatgtcattgaattg
gaaaaatggagggacctccatgtcaccagtttgtatgatcaatcactccaaaagttgcaa
aaggagagcctgctatcaaagagactgaaagcactccctgttagtatgcttgcatttcaa
gatctgatataccctttggaggactcatgggttcagtcaggccttggacatgattatgga
attagtaaagaccatatagaaaaggctgctactctacactacaatggtgtcatgaaacct
tggcttgatttggggatacacaattacaaaagctactggaggaagtacatgactacagga
gagatattcatgagggaatgcaacattcactaa
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