Panicum virgatum (switchgrass): 120646026
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Entry
120646026 CDS
T07260
Name
(RefSeq) transcription factor MYB60-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120646026
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120646026
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
120646026
NCBI-ProteinID:
XP_039778666
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Position
8K:complement(1708824..1710350)
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AA seq
316 aa
AA seq
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MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNY
LRPGIRRGNFTPHEEGIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNIHLKKKLKKHQ
AIGAIFAPPPPSEPSSIIPTTAGAGHVDLHHDMPLSKDYSSLHPAACTNTAEVTHQLIAR
RSPFAATDGDSSSSSYASSVDNISRLLDGFMKSSPPHNNTADIKPSATEVNPLLSFNQYQ
YHMAGGTTLPTFNDMLPSPPPQQPALMGHSGYDEPRQQHQQGPLSPIEKWLFEEAAEQVT
GLMDLSDGCCSVPMMF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggggaggccgccgtgctgcgacaaggtgggcatcaagaagggaccatggacgccggag
gaggacatcatcctggtgtcctacatccaggagcacggccccggcaactggcgctccgtg
cccatcaacaccggcctcatgcgctgcagcaagagctgccgcctccgctggaccaactac
ctccgccccggcatccgccgcggcaacttcaccccccacgaggaaggcatcatcgtccac
ctccagtccctgctaggcaacaggtgggcagccatagcttcttaccttccgcagagaacc
gacaatgacatcaagaactactggaacatccacctcaagaagaagctcaagaagcaccaa
gccatcggcgccatcttcgcgccacctccgccctccgaaccttcttccatcataccaacc
accgccggcgccggccatgtcgatctccatcatgacatgcccctctccaaggactacagc
tccctacacccggccgcctgcaccaacacagctgaggtcacccatcagctcatcgcccgg
cgatcgccgttcgccgccaccgacggtgacagctcctcctcgtcgtacgcctccagcgtg
gacaacatatccaggctgctcgatggcttcatgaagagctccccgccgcacaacaacact
gccgacatcaagccctcggccaccgaggttaaccctttgctgtcgttcaaccagtaccag
taccacatggccggcggtaccacgctaccaaccttcaacgacatgctgccgtcgccaccg
ccgcagcagccggcgttgatgggacacagcggctacgacgagcccaggcagcaacaccag
caggggccactgtctccgatcgagaagtggctgttcgaagaggccgccgagcaggtcacc
ggcctcatggatctgtccgacggctgctgctcagtcccaatgatgttctag
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