Panicum virgatum (switchgrass): 120646029
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Entry
120646029 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 21-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120646029
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120646029
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120646029
NCBI-ProteinID:
XP_039778669
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Position
8K:complement(1754993..1759127)
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AA seq
525 aa
AA seq
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MENGNKITSGSSRGGEEEEEAKVPLLEPRAADDHHGGGSRSLSKVEQEEEEQQDDEWSSL
GRRAWEENKKLWVVAGPSIFTRFSSFGLTVISQAFVGHIGATELAAYALVSTVLMRFSNG
ILLGMASALETLCGQSYGAKQYHMLGIYLQRSWIILFVCSVVLLPVYLFTEPMLVALGQD
PKISAVAGTISLWYIPIMFSYVWSFTLQMYLQAQSKNMIITYLAMLNLALHLALSWLMTV
KFQLGLAGVMGSMIIAMWIPVFGQLAFVFFGGCPLTWTGFSSAAFTDLGAIIKLSLSSGV
MLCLELWYNTILVLLTGYMKNAEVALDALSICLNINGWEMMISIGFLAATGVRVANELGA
GSARRAKFAIYNVVITSFLIGFVLFVLFLFFRGNLAYIFTESRAVADAVADLSPLLAFSI
LLNSVQPVLSGVAVGAGWQSVVAYVNITSYYLIGVPLGGVLGYVVGLHVKGIWIGMLLGT
LVQTIVLLFITLRTDWEKQVVTAQERLKRWYMEENRRLQGSRSNP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggcaataagatcactagtggtagcagcaggggaggagaagaggaggaggag
gccaaggtgcccctgctcgagcccagagcggcagacgaccaccatggaggtggcagcaga
agcttgagcaaggtggagcaggaggaggaagagcagcaagatgatgagtggtcgtcgctg
gggcggcgggcgtgggaggagaacaagaagctgtgggtggtggcggggccctccatcttc
acccgcttctcctccttcggcctcaccgtcatcagccaggccttcgtcggccacatcggc
gccaccgagctcgcagcatacgcactcgtctcaaccgtcctcatgcgattcagcaacggc
atcctgctgggcatggcgagcgccctggagacgctgtgcggccagtcctacggcgccaag
cagtaccacatgctcggcatctacctccagcgctcctggatcatcctcttcgtctgctcc
gtcgtcctgctccccgtctacctcttcaccgagcccatgctcgtcgccctgggccaggac
cccaagatctccgccgtcgccggcaccatctccctctggtacatccccatcatgttctcc
tacgtctggtccttcacgctccagatgtacctccaggcgcagagcaagaacatgatcatc
acctatctcgccatgctcaacctcgccctccacctcgccctctcctggctcatgaccgtc
aagttccagctcggcctggcaggggtcatgggctccatgatcatcgccatgtggatcccc
gtgtttggccagcttgcctttgtcttcttcgggggttgccctctcacatggaccgggttc
tcgtctgctgcgttcactgacctcggtgccatcatcaagctctcgctgtcttctggtgtc
atgctctgtttggaattgtggtacaacaccatattggtgctcctcacagggtatatgaag
aatgcagaggttgcacttgacgccctttcaatatgccttaatatcaacggttgggagatg
atgatttctatcggctttttggctgcaacaggagtgcgagtggcaaatgagcttggagct
ggaagtgcaagaagggccaagtttgcgatatacaatgtcgtcatcacgtctttcttgatc
ggatttgtgttatttgtgctcttccttttcttccgtggaaaccttgcttacatatttact
gagagtcgagcagtggccgatgctgttgctgacctctcacctctgctagccttctccata
ttgttaaacagtgttcaaccagtgctatcaggtgtcgctgttggtgctggctggcaaagt
gtagttgcctacgttaacattacatcatactacttgattggtgtcccccttggaggagtc
ctaggctatgtagtgggacttcatgtaaagggcatttggattggcatgctgctcggaaca
ctggtccaaactattgtgcttctgttcataacattaaggaccgactgggaaaaacaggtg
gtgactgctcaagagagattgaagagatggtacatggaagagaacagaagactgcagggc
tctaggagcaatccttga
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