KEGG   Panicum virgatum (switchgrass): 120646173
Entry
120646173         CDS       T07260                                 
Name
(RefSeq) proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
pvir03410  Base excision repair
pvir03420  Nucleotide excision repair
pvir03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120646173
   03410 Base excision repair
    120646173
   03420 Nucleotide excision repair
    120646173
   03430 Mismatch repair
    120646173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120646173
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120646173
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    120646173
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     120646173
   MMR (mismatch excision repair)
    Other MMR factors
     120646173
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    120646173
SSDB
Motif
Pfam: PCNA_N PCNA_C EF-hand_15
Other DBs
NCBI-GeneID: 120646173
NCBI-ProteinID: XP_039778799
LinkDB
Position
8K:13147073..13148753
AA seq 265 aa
MLELRLVQATLFKNVVEALGDLFSTAHFNSSRTGLELQAKDNSRVTLIMLLLRAEAFDHY
LCDRGLSMGLNLAGMAKAFCCTNNDDIITIKAEEDWSDTVTFTFESPEDGDEISYFHFDF
MVINGVPLEIPEYPESEYQAIVRMPSAKFMPICNKLSSFGDRDTVVIISVDKESVDFLSR
GKTGTLTIFCRETQTVDKPKEPTLIEMKEKVSLMFDLRYMNSSKASTLSDQVTISLSSKL
PAVFEYKITEMSCIRYYMLPRNEGR
NT seq 798 nt   +upstreamnt  +downstreamnt
atgttggagctgcggctggtgcaggcgaccctcttcaagaatgtcgtggaggcgctcggc
gacctgtttagtacggcccacttcaactcctctagaacgggcttggagctccaggccaag
gacaacagccgcgtcacgctcatcatgctcctcctccgcgccgaggccttcgaccactac
ctttgcgaccgcggcctctccatgggcctcaacctcgccggcatggccaaggctttctgc
tgcaccaacaacgacgacatcatcaccatcaaggccgaggaggactggtccgacaccgtt
accttcacgttcgagtcgcccgaggatggtgatgagatttcatattttcattttgatttc
atggtcatcaatggcgtgcccctcgaaatcccggaatacccggaatccgagtaccaggcc
atagtccgcatgccctctgccaagtttatgcctatctgcaacaagctcagtagcttcggg
gacagggacactgttgtcattatctcggtggataaggagagtgtcgacttcctttctcgg
ggaaaaactgggaccttaacaattttctgcagagaaacccaaactgttgacaagccaaaa
gaacctacccttatagagatgaaagaaaaggtttccctgatgtttgacctgaggtacatg
aactcctccaaggcgtctaccctgtctgatcaagtgactatcagtctttcatccaagcta
cccgcggtgttcgagtacaagatcacagagatgagctgcatcagatattacatgttgcca
aggaatgaaggaaggtga

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