Panicum virgatum (switchgrass): 120646380
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Entry
120646380 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 2-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120646380
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120646380
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Gene cluster
GFIT
Motif
Pfam:
BACK_BPM_SPOP
BTB
MATH_2
MATH
BACK
HTH_20
Motif
Other DBs
NCBI-GeneID:
120646380
NCBI-ProteinID:
XP_039778900
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Position
8K:48216138..48217383
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AA seq
371 aa
AA seq
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MPISASSPTTGGGGGGGGGGSTSTIVSEITSGWHELRVPGYAATKGGVGKFINSAAFVVG
GHSWYIRYYPDGNNDKSAGWVSVYLYLDQPAAAAVDGGDVKARYKLSLIADDGEDLSSRT
SGYSFWGPGKPRGYCQFIKGADMEASLRGHGFRIRCDVTVVKETCVDPTAAATAEALAVP
PPELDRHLGALLDGEVGGDVAFDVGGERITAHRCVLAARSPVLMAALFGPMREDAAATGS
IRVGDVEPRVFKAMLRFVYTDAIPEVDDEEEDEGYSKVGMAQHLLVAADRYGLPRLKAMC
EATLLEHIDTSAVATTLTLAEQHGCHGLKEGCFRFMRAPGNTKAVMASEGFQHLRTSCPF
LIEEMLAKLAP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctccgcctcttctcccaccaccggcggcggcggcggcggcggcggcggcggc
agcacgtcgaccatcgtctccgagatcacttccgggtggcacgagctccgggtcccgggc
tacgccgcgaccaagggcggcgtcggcaagttcatcaactccgccgcgttcgtcgtcggc
gggcacagctggtacatccggtactaccccgacggcaacaacgacaagagcgccggctgg
gtgtccgtctacctctacctcgaccagcccgccgccgccgccgtcgacggcggcgacgtc
aaggcgcggtacaagctcagcctgatcgccgacgacggcgaggacctctcgtctcggacc
agcggctactccttctggggccccggcaagccgcgcggctactgccagttcatcaagggg
gcggacatggaggcctccctcagaggccacggcttccggatccgatgcgacgtcaccgtc
gtgaaggagacctgcgtggaccccaccgccgccgccaccgccgaggccctcgccgtgccg
ccgccggagctggaccggcacctcggcgcgctcctggacggcgaggtgggaggggacgtg
gcgttcgacgtcggcggcgagcggatcacggcgcacaggtgcgtgctcgccgcgcggtcg
ccggtgctcatggcggcgctcttcggcccgatgagggaggacgccgccgccacgggcagc
atacgggtcggcgacgtggagccgagggtgttcaaggccatgctccgcttcgtctacacc
gacgcgatcccggaggtagacgacgaggaggaggacgagggctacagcaaggtggggatg
gcgcagcacctgctggtggcggcggacaggtacggcttgccgaggctgaaggcgatgtgc
gaggccacgctgctcgagcacatcgacacgagcgccgtggcgacgacgttgacgttggcc
gagcagcatgggtgccatgggctcaaggaaggatgcttcaggttcatgagagctccgggc
aacacgaaggcggtcatggcgagcgagggattccaacacctgaggaccagttgccccttt
cttattgaggagatgcttgctaagcttgccccatga
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