Panicum virgatum (switchgrass): 120646424
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Entry
120646424 CDS
T07260
Name
(RefSeq) myosin-6-like
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120646424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120646424
04131 Membrane trafficking [BR:
pvir04131
]
120646424
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120646424
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120646424
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120646424
mRNA cycle factors
P-body specific factors
120646424
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120646424
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120646424
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120646424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
AAA_16
Agenet
AAA_22
DUF87
Motif
Other DBs
NCBI-GeneID:
120646424
NCBI-ProteinID:
XP_039778931
LinkDB
All DBs
Position
1K:55733587..55751576
Genome browser
AA seq
1512 aa
AA seq
DB search
MAAQASVAVGSQVWVEDPDVAWIDGEVIKVNGDTVTVKCSNEKTVTAKATNVHAKDPEEA
PCGVDDMTKLAYLHEPGVLQNLKSRYDMNEIYTYTGNILIAVNPFRRLPHLYDTQMMQQY
KGADFGELSPHPFAVADVAYRLMLNEGISQSILVSGESGAGKTESTKMIMRYLAYMGGKA
ASEGRTVEKQVLQSNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAVRTYLLE
RSRVCQISDPERNYHCFYMLCSAPPEERERYKLGDPKTFHYLNQSNCIKLEGLDESKEYL
ETRKAMDTIGISSEEQEAIFRVVAAILHLGNVEFAEGVDGDSSKPKDEKSLFHLRTAAEL
FMCDAKALEDSLCQRIIVTRDENIVKTLDPESAKGSRDALAKTVYSRLFDWLVNKINNSI
GQDPNSKCLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFIDNQDILDLIEKKPGGIIALLDEACMLPRSTHETFAQKLYQTFKNHKRFAKPKL
SRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLNASKCAFVSGIFPLLSEDSSKSS
KFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNLLKPAIFENQNVLQQLRCGGVMEAI
RISCAGYPTRRTFYEFIDRFGILAPDVLSGSSDEVSAVRRLLEKVDLQGYQIGKTKVFLR
AGQMAELDARRNEVLGRSASLIQRKVRSFLAQKSFIALRRSALQIQTVCRGELARREYHN
LRREAASLKIQTWYRMHTARKAYKELFTSAVTIQSALRGMCARKELHFRRQTRAAIIIQS
RCRQFLARLHYSRTKKAAITTQCAWRGKVARKELRKLKMAARETGALQAAKNKLEKQVEE
LTWRLQLEKRMRADLEEAKSQENAKLQAALQEVQQQYKETKEILVQEREAAKKAAEIAPV
IKEVPVVDTELMNKLRDENDKLKTLVSSLEKKIDDTEKKYQETSKISEERLKQAMDAETK
IVDLNMAMLRLQEKISTMESDEKVQRQALLNTPVKSMSEHLSIPIAPKNLENGYHEVEEQ
KEPQSAPPAIKEYGNGDPKLRKSSADRQLENVDALIDCVGKNLGYCAGKPIAAFTMYKCL
LHWKSFEAEKTSVFDRLIQLIGSAIENEDDNDNLAYWLSNTSSLLFLLQRSLKAAGAPGS
VSRKKPPQPTSLFGRMAQGLRSASFANMHAEATDVVRQVEAKYPALLFKQQLTAYVEKIY
GIVRDNIKKELSSLISLCIQAPRTMKASMLRVSGRLSGQAQNQSNHWQKIIESLDKLLKT
LQDNYVPPVLAQKIFTQIFSYINVQLFNSLLLRRECCSFSNGEYVKAGLAELELWCAKAT
TEYAASSWDELKHIRQAVGFLVIFQKFRISYDEIVNDLCPILSVQQLYRICTQYWDDKYN
TQSVSSDVLSNMRVLMTEDSNNAESSSFLLDDNSSIPFSVDDITNSMQEKDFSDMKPAEE
LLENPAFQFLQD
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacaagcttccgttgcggtgggatcccaagtttgggtcgaggaccctgatgtg
gcctggattgatggggaggtcataaaagtcaatggagacacagtgacggtcaaatgttcg
aacgagaagacggttacggcgaaagcaactaatgtccatgctaaagatcccgaggaagca
ccatgtggagttgacgacatgacaaagcttgcctatctgcatgaacctggggttcttcag
aatttgaaatctagatatgacatgaatgaaatttatacatataccggaaatatcttgatc
gctgtaaatcctttccgaaggctgccccatctatacgatactcagatgatgcagcaatat
aaaggggcggattttggtgaattaagtccccatccttttgccgttgcagatgttgcatat
agattgatgttgaatgaaggaataagtcagtcgattcttgttagtggagaaagtggtgct
ggtaaaacagaaagcacaaaaatgatcatgcgctatcttgcttacatgggtgggaaggcc
gcatctgaagggcgaactgttgagaagcaagtgcttcagtccaatcctgttcttgaagca
tttggaaatgcaaagactgtcagaaacaataattcaagtcgtttcggtaaatttgttgag
atccagtttgatcagaaagggagaatatcaggagctgccgtaagaacttatctcctcgag
agatcccgtgtctgtcaaatatctgatccagagagaaattaccattgtttctacatgcta
tgttctgcccctcctgaggagcgtgagagatacaaactcggagatcccaaaacgtttcac
taccttaatcagtctaactgcatcaagcttgaaggcctagatgaatctaaagagtatctt
gaaaccaggaaggctatggatactattgggattagttctgaagagcaggaagcaatcttt
cgggttgttgctgctattctccacctggggaatgttgagtttgcagaaggggttgatgga
gattcatcaaaaccaaaagatgaaaaatctctgtttcatttgaggacagctgctgagctc
ttcatgtgtgatgcaaaagctctagaagactcactatgtcaacgcatcattgtgactcgc
gatgagaacatagtaaaaactttggatcctgaatctgccaagggaagtagagatgcactc
gctaagactgtttactcgcggttgttcgattggcttgtgaataagatcaacaactctatt
ggccaagatccaaactcaaaatgcttgatcggagtgctggatatctacgggtttgaaagc
ttcaagacaaacagctttgagcagttttgtatcaatctgacaaatgaaaagctgcaacaa
cacttcaatcagcatgtctttaagatggaacaggaagagtacaccaaagaagaaattaat
tggagttatattgagttcattgacaaccaggatattcttgatctcattgagaagaaacct
ggtggaattattgcccttctagatgaagcttgtatgttgccgagatcgacacatgagaca
tttgctcagaaattgtaccaaactttcaaaaatcacaagcgctttgctaagccaaaatta
tctcggtcagactttactatatgccattatgcaggagatgtcacttatcaaacagagtta
tttctggacaagaataaagattatgttgttgctgaacatcaggctctcttgaatgcttca
aaatgtgcatttgtttcgggcattttccctcttttatctgaggattcctctaaatcttcc
aagttttcatccattggttctaggttcaagcaacaattgcaatctctcttggaaactctg
agtgcaactgagccacactacatccgttgtgtaaagcccaataacttgttgaagcctgca
atttttgagaaccaaaacgttcttcagcaactaagatgcggaggagttatggaagcaatt
aggattagctgtgctggatatccaaccagaagaacattctatgagttcatagaccgtttt
ggtattcttgcccctgatgttttgagtggaagttctgatgaggtcagtgctgtaaggagg
ttgttagagaaggtagatctgcaaggttatcagattggcaagacaaaagtattccttcgt
gctggtcagatggctgaacttgatgctcgtagaaatgaagtgttagggcgttcagctagc
ttgattcagaggaaagtccgctcatttttggcacagaagagtttcatcgcactgcgacga
tcagctttacaaatccagacagtttgtcgcggggagcttgcaagaagagagtaccacaac
ctgcggagagaagctgcttcactcaagatccagacctggtaccgtatgcatactgccaga
aaagcatacaaagagctttttacttcagcagttaccattcagtcagcactgcgtggtatg
tgtgcacgtaaagagttgcactttagaagacaaacaagagctgcaattattatccagagt
cgctgccgccaatttttggcaaggttgcattattcaaggacaaagaaagctgcaattact
acacagtgtgcctggagaggaaaggttgctagaaaggagctccgaaagctcaaaatggct
gcccgggaaactggtgccttgcaagcggccaaaaacaaacttgaaaagcaagttgaagag
cttacatggcggttacagttggagaagcgcatgagagctgatcttgaggaagctaaatca
caagaaaatgcaaagttgcaagctgcactgcaggaggtgcaacagcagtacaaagaaaca
aaagaaatactagtacaggagagggaagcagccaagaaggctgcagagatagctccggtc
ataaaagaggtccctgttgtagatacagagctcatgaataagcttagagatgaaaatgac
aaactaaagactttagtcagttctcttgaaaagaagattgatgatactgagaagaaatat
caagaaacaagcaaaattagtgaggagaggctcaaacaggcaatggatgctgagacaaaa
attgttgacctgaacatggcaatgctaaggcttcaagagaaaatatccaccatggaatct
gatgagaaagtgcaaagacaagcactgttaaacacgcctgtcaagagtatgtctgaacat
ttgtcaattccgattgctccaaagaatttggagaatggctatcatgaggttgaagaacag
aaggaaccacaaagtgcaccacctgctattaaggaatatgggaatggtgatccaaaactg
aggaaatcttctgctgacaggcaacttgaaaatgtggatgcacttattgactgtgtaggg
aaaaaccttggatattgtgctgggaagccaattgctgcttttaccatgtacaaatgcctt
cttcattggaaatcttttgaggcggagaagactagtgtttttgaccgtctcattcagtta
ataggatctgcaattgagaacgaggacgacaatgacaaccttgcctactggctctcgaac
acatctagcttactgttcctactgcagagaagtctcaaggctgctggtgctcctggtagt
gtttcacgaaagaaacctcctcagccgacatcattatttggcaggatggctcaaggcttg
cgttctgcatctttcgccaatatgcatgcggaagcaacagatgttgtccgccaagttgag
gccaaatatcctgctttgcttttcaagcagcagttaactgcctatgtggagaagatatat
ggaattgtacgagacaatattaaaaaggaattatcatctttgatttcattatgtatccag
gccccaagaacaatgaaagctagcatgctgcgagtttctggacgattatctggtcaagct
cagaatcagagcaatcactggcagaaaattattgaaagcttggataagctattgaagaca
ctgcaagataactatgtacccccagttttagctcagaaaatctttacccagatattctcg
tacattaatgtacagctattcaacagtctactgcttcgccgggagtgttgctccttcagc
aatggagagtatgtcaaggctggtcttgctgagcttgagttgtggtgtgcaaaggcaaca
actgagtatgcagcttcttcatgggatgagctcaagcatatcagacaggctgttggcttt
ttggttatattccaaaaattcagaatatcttatgatgagatagtcaatgacctatgtccg
atcttgagcgttcaacaactctacagaatttgtacacaatactgggatgacaagtataat
acccaaagtgtttcgtcagatgttcttagtaatatgcgggtgctaatgacagaggattct
aacaatgctgaaagcagttcatttctgttggatgataattcaagcatcccgttctcggtg
gatgatatcacgaactcaatgcaagagaaggatttctcagatatgaaaccagccgaggag
ctactcgagaaccctgccttccagtttttacaggactag
DBGET
integrated database retrieval system
