Panicum virgatum (switchgrass): 120646516
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Entry
120646516 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase SDIR1-like
KO
K22378
E3 ubiquitin-protein ligase RNF181 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120646516
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120646516
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120646516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8_fungal
FANCL_C
Bcl-2_BAD
zf-Nse
zf-C3HC4_4
Rad50_zn_hook
zf-P11
Motif
Other DBs
NCBI-GeneID:
120646516
NCBI-ProteinID:
XP_039778999
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All DBs
Position
8K:complement(3841578..3842258)
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AA seq
226 aa
AA seq
DB search
MPMEEAWEIGESEAQGGGGGESPAFVFEQATFVLGGRTYTARMRHFQRSAPAAATPDDDE
HLIPSVFRPASSSSPPQAHAAAAPGSSLTTNKRARAPASSKAILGLREVTAPPTGSSDCC
AICLQDLQAHQGPAAAEPTTLSLRVMPCSHTFHQRCIFEWLRRNAVCPLCRHQLPTEEED
EQQDQEQDQGRRSRSRVVYNEDGQHHILWHYTEQPVAGEVPELDEE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggaagaagcctgggagattggggaatcggaagcccaaggaggaggaggagga
gagtcgccggcgtttgtgtttgaacaggccacgtttgtccttggtggccggacctacacc
gccaggatgcggcactttcagcggagtgcacccgcggcggcaacacctgacgacgacgag
cacctcattccatctgttttccggccggcgtcgagctcatcgcctccccaagcccatgcc
gccgccgctcccggttccagtctcaccaccaacaagcgcgcccgcgcccctgcctccagc
aaggccatcttgggcctgcgggaggtgacagcgccgcccacgggcagctccgactgctgc
gccatctgcctccaggatctccaagcccaccagggtccggcggcggcggagccaacgacc
ctcagcctcagggtcatgccttgctcccacaccttccaccagcgctgcatcttcgagtgg
ctccgccggaacgccgtctgccctctctgccgccaccagctgcccacggaggaggaggac
gagcagcaggaccaggagcaggatcaggggagaaggagcaggagccgggtcgtctacaac
gaggacggccagcaccatatcctttggcactacacggagcaacccgtggccggcgaggtg
cccgagctggacgaggagtag
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