Panicum virgatum (switchgrass): 120646573
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Entry
120646573 CDS
T07260
Name
(RefSeq) auxin-responsive protein IAA10-like isoform X1
KO
K14484
auxin-responsive protein IAA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120646573
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Gene cluster
GFIT
Motif
Pfam:
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
120646573
NCBI-ProteinID:
XP_039779010
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Position
1K:complement(55797475..55800608)
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AA seq
291 aa
AA seq
DB search
MRGGAGPTVAFVAGDSPPDAAAEEEVEENSGGEEEQQEDDELELGLCLGSKKQQQPPSPA
PCRILTARDLQPGALSPDSSVSSSSPAAGAAAASKRAKADTTPNATTSPGTVASGHPQSS
FGVVGWPPIRTFRMNSLFNQAKDNASEAGTKKAADESCMQKDKKGSEKKGRVVGWVKVNM
DGDIIGRKVDLNAHCSYKTLASALELMFMKPSISLCTSSSAKSLNLLDSSSEYQLTYEDR
DGDWMLVGDVPWEMFVGSVKRLKIMRTSDANGLGPQFQGVHRAAGSPRGRT
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaggagcggggcccacggtggcgttcgtcgccggcgactcgcctccggatgca
gcggcggaggaggaggtggaggagaactctggcggcgaggaggagcagcaggaggacgac
gagctggagctggggctctgcctaggctccaagaagcagcagcagcccccgtcgccagcg
ccgtgccggatcctgacggccagggacctgcagccgggggccctgtctccggactcctcc
gtgtcctcctcctcccccgcggcaggggcagcggcggccagcaagagggccaaggcggat
acaacgcccaacgccaccacctcgccggggacggtcgcttctggccacccacagagcagc
tttggagttgtcggatggccacccataagaactttcaggatgaacagcctattcaaccag
gccaaagacaatgcttcagaggctggcaccaagaaggctgccgatgaatcttgcatgcag
aaagacaagaaggggagcgagaagaaaggacgggttgtcggctgggtgaaggtgaacatg
gatggagatatcattggaaggaaggtcgatcttaacgcccattgttcgtataagaccctt
gcgtcagcacttgagctaatgttcatgaagccgtccatcagtctttgcacttctagtagt
gcaaagtctctgaatctattggacagctcatcggaatatcaactcacctatgaggacagg
gatggggattggatgctcgtcggagatgttccatgggagatgtttgtaggttcagtgaag
aggctcaagatcatgaggacatcagatgctaatggtctcggtccgcaattccaaggggtt
cacagagctgcaggttccccaagaggtagaacttga
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