Panicum virgatum (switchgrass): 120646600
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Entry
120646600 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA thiolase 2, peroxisomal-like
KO
K07513
acetyl-CoA acyltransferase 1 [EC:
2.3.1.16
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00071
Fatty acid degradation
pvir00280
Valine, leucine and isoleucine degradation
pvir00592
alpha-Linolenic acid metabolism
pvir01040
Biosynthesis of unsaturated fatty acids
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00087
beta-Oxidation
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
120646600
00592 alpha-Linolenic acid metabolism
120646600
01040 Biosynthesis of unsaturated fatty acids
120646600
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120646600
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120646600
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.16 acetyl-CoA C-acyltransferase
120646600
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Motif
Pfam:
Thiolase_N
Thiolase_C
Thiolase_C_1
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
120646600
NCBI-ProteinID:
XP_039779012
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Position
1K:complement(55818571..55823084)
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AA seq
459 aa
AA seq
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MEKAIDRQRVLLAHLLPSSPSSQPQLEASACAAGDSAAYQRTSSFGDDVVVVAAYRTPIC
KAKRGGFKDTYPEDLLTVVLKAVLDNTKINPSDIGDIVVGTVLGPGSQRANECRMAAFYA
GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMSINSIAWEGQVNPKI
SAFQKAQDCLLPMGVTSENVAHRYGVTRQEQDQAAAESHRRAAAATASGKFKDEIVPVPT
KIVDPKTGEEKKVVISVDDGIRPGTTASGLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLL
MKRSVALKKGLPILGVFRSFAAVGVDPAVMGVGPAVAIPAAVKSAGLQIEDIDLFELNEA
FASQFVYCCNKLGLDRSKVNVNGGAIALGHPVGATGARCVATLLNEMKRRGRDCRFGVIT
MCIGSGMGAAAVFERGDTVDALSNVRDAQSHNFLSRDAK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcgatcgaccggcagcgggtcctcctcgcccacctcctcccctcctcgccg
tcctcgcagccgcagctggaggcgtcggcgtgcgcggccggggacagcgccgcgtaccag
aggacctcctccttcggagacgatgtcgtcgtcgtcgctgcataccgcacgccgatatgc
aaggccaagcgaggaggtttcaaggacacgtacccagaggacctccttactgttgttctc
aaggctgttctggacaacactaaaatcaatccaagtgacattggtgacattgtggttggg
acggtgctaggtccaggttcgcagcgtgcaaatgagtgcagaatggctgctttctatgct
ggattccctgaaactgttcctgtgagaactgtcaaccgacaatgctcatctgggttacag
gcagtagctgatgttgccgccgctataaaggctggtttctatgacatagggattggtgct
ggtttggaatccatgtcgataaattccattgcttgggaaggacaagtaaacccaaaaata
agtgcattccagaaagcacaggattgtcttctgcccatgggagttacttctgaaaatgtt
gctcatcgatatggtgtcaccaggcaagagcaagatcaggctgctgccgagtctcataga
agagctgctgcagccacagcttctggaaaattcaaggatgagattgtccctgtcccaaca
aagatcgttgatcctaaaactggagaggagaagaaagttgtgatatctgttgatgatgga
attaggcctggcaccacagcatctggattagcaaagcttaaaccagttttcaaaaaggat
gggactactactgcaggcaattctagtcaagtaagtgatggtgctggagctgttctcctc
atgaagagatctgtagctctgaagaaaggacttcctattcttggtgttttcaggagcttt
gctgctgttggagtggacccagctgttatgggtgttggtcctgctgtagccattcctgct
gcagtgaagtctgctggccttcagatagaagacattgatctctttgaactgaatgaggca
tttgcctctcaatttgtctattgctgcaacaagctgggactagaccgatccaaagtaaat
gtgaatggaggcgcgattgcccttggacaccctgttggtgcaacaggtgcgcggtgtgtg
gctactcttctgaacgaaatgaagcgccgaggaagagactgcagatttggtgttataacc
atgtgcatcggatctgggatgggtgcagcagctgtgtttgagcggggagacacggtggat
gcactctccaacgtgcgggatgcccagtcacacaattttctatctagggatgcaaagtag
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