Panicum virgatum (switchgrass): 120646667
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Entry
120646667 CDS
T07260
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2-like
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120646667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120646667
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
120646667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
Sec7-like_HDS
DCB
Mon2_C
TPR_28
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
120646667
NCBI-ProteinID:
XP_039779016
LinkDB
All DBs
Position
9K:60971623..60980725
Genome browser
AA seq
1794 aa
AA seq
DB search
MASAAAASPPTPPESDPRLVEVFTPFLEKLIKNASWRNKAHSKLSHTAKSILDRLQKPPP
AAEAQAPSTPTSAPSTPTSSSAQPGPLRSLSLADSELLLAPVTSALGSGSAKLAEAALEL
LHRLIAHSYIHGEADPSADPSAQLVASLLDAACNALGLDDEHIELLLLKTLLSAVTSTSV
RLHGDCLLRAVRACYDMYLGSRSAVNQATAKASLVQMLVIVFRRMEADSSTVPVQPIVVA
DMIELPDAGPGSSPTADPNVVQGFISKIIGDFDGALTPLARTTSSTGAGATVAHDGAFET
TAAAEEGANPADLLDSTDKDMLDAKYWEISMYKTAIEGRKDELGVEGAVVGTLDDDADVR
IGNKLRRDAFLVFRALCKLSMKTPPKDAPADPIVMRGKILALELLKILLENAGAVFRTSE
RFLGAIKQYLCLSLLKNCASSHMIVFQLSCSIFISLVSRFRPGLKAEIGVFFPMIILRVL
ENIAQPNYQAKMIVLRFLEKLCGDSQILVDIFLNYDCDVHSSNIFERMVNGLLKTAQGPP
AGVPTTLVPPQDTTMKSEAMKCLVAILRSMGDWMNKQLRIPDPASPIVESEKNDNDGGNE
LPQTDNNGDESSEASDSHSELSNGISEAASLEQRRAYKMELQEGISLFNRKPKKGIEFLV
KASKVGESPEEIAAFLKSASGLNKTMIGDYLGEREDLSLKVMHAYVDSFEFQGMEFDEAI
RAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMV
KNKMSPEDFIRNNRGIDDGKDLPEEFMRSLYERIWKKEIKMKEDEFVPQQQQSTSSNKIL
GLDNILNIVVRKRGSSMETSDDLIKHMQEQFKEKARMSESVFYPATDVVVLKFMVEVCWA
PMLAAFSVPLDQSDDEIVISQCLEGFRSAIHVTAAMSMKTQRDAFITSLAKFTSLHSAAD
IRQKNVEAIKAILLIADEDGNYLQEAWEHILTCVSRFENLHLVGEGAPPDATFFALQQPD
LDKSKQAKSSILPVLKKKAPNAASASKRGSYDSAGVGGKASGVDQMNNEVTSLLEQVGMA
EMNRVFVRSQKLNSEGIIDFVKALCKVSMEELRSASDPRVFSLTKIVEIAHYNMNRIRLV
WSSIWHVLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVVV
MRKSRAVEIRELIIRCVSQMVLARVNHVKSGWKSMFMVFATASYDDHKNIVLLAFEIIEK
ILREYFPYITETESTTFNDCVNCLIAFTNSRFNKDISLNAIGFLRFCAAKLAEGDIGSSR
LKDNPTSNSNPPSPHLASDGKQEGAVLTDKDDHIHFWFPLLAGLSELTFDLRPEIRKSAL
QVLFDTLRNHGHLFSLPLWEKVFDSVLFPIFDYVRHAIDPSGSSPQGQSVENDPAELDQD
AWLYETCTLALQLVVDLFVRFYSTVNPLLKKVLSLLTSFIKRPHQSLAGIGIAAFVRLMS
SAGSMFVDEKWLEVVLSMKEAATETLPDFTYISSGAYLQNVPTENGGSSEQREDESQPLE
NDNEESSRSRNLYFAIGDAKCRAAVQLLLIQAVMEVYNMYRAQLSAQNTVILFEALHAVA
IHAHKINSDNDLRSKLQELGSMTQMQDPPLLRLENESYQLCLTILQNIFLDSAPNHGSAE
VVEGHLISLCKEVLEVYLTTARPAQLSSGTQSLGHWLIPVGSSKRRELAARAPLVVATLQ
AISGLGDSSFEKNLGQFFPLLAGLISCEHGSIEVQVALSDMFSTWVGPLVLQSC
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcggccgccgcgtcgccgccgaccccgccggagtccgacccgcgcctcgtc
gaggtcttcacacccttcctcgagaagctcatcaaaaacgcctcgtggcgcaacaaggcg
cactccaagctctcgcacacagccaagtccatcctcgaccgcctccagaagccgccgccc
gcagccgaggcgcaggcgccgtccaccccgacctccgccccctccacaccgacctcctcg
tccgcgcagcctggtccgctgcgtagcctgtcgctcgcggactcggagctgctcctcgcg
cctgtgacctccgcgctcggctcgggtagcgccaagctcgccgaggctgcgctcgagctc
ctccacaggctgatcgcgcactcgtacatccatggggaggccgacccatccgctgatccc
tcggcgcagctcgtcgcctcgctcctcgacgccgcctgcaacgcgctcggcctcgacgac
gagcacattgagctcctcctcctcaagacgctcctctcggcggtcacctccacgtccgtg
cgcctccacggggattgcctgctacgtgctgtgcgcgcgtgttatgatatgtacctgggg
agccgcagtgctgtcaaccaggccactgccaaggcttcgctcgtgcagatgctggtgatt
gtgttccgccgcatggaggctgactcgtcgacggtgcctgtgcagcccatagtcgtggct
gacatgattgagctgcctgacgctggtcctggctcctcgccaactgccgaccccaatgtt
gtacagggattcatttcgaagatcattggtgactttgatggtgcactcacacctctagca
cggacaacttcgtcaacaggggcaggggcaactgtagcccatgatggtgcgtttgagaca
acagcggcagcagaggaaggggcaaacccagcagatctgcttgattcgacggataaagac
atgcttgatgccaaatactgggagatcagcatgtataaaacagctattgagggtcgtaag
gatgagcttggtgtagagggagcagtggtgggcaccttggacgatgatgctgatgtgcgg
attggaaataagctgcggagggatgctttcttagttttccgggctttgtgtaagctttcc
atgaagacaccacccaaggatgctccagcagatcccatagtgatgcgggggaagatcctt
gcccttgagcttctcaagatcttacttgaaaatgctggtgctgtgttccggaccagcgag
aggtttctcggtgccatcaagcagtatctatgcctatcacttttgaagaactgtgcctca
tcacatatgattgtttttcagctatcttgttctatttttattagtctagtctcaagattc
agaccaggattaaaggcagaaattggagtgttctttcccatgatcattttgagagttttg
gagaatattgcacagccaaattatcaggcaaagatgattgttcttcgttttctggagaag
ctctgtggtgattctcaaattttagttgacattttcctcaattacgattgtgatgtacac
tcatcaaacatatttgagaggatggtgaatggtctactaaagacggctcaagggcctcct
gctggtgtccctaccacattggtaccacctcaggataccacaatgaaaagtgaagcaatg
aaatgcttagttgctattctcagatccatgggggattggatgaataagcagctacgtatt
cctgatcctgcttctcctattgtagaatcagagaaaaacgataatgatggtggcaatgag
cttccccagacggataacaatggagatgagtctagtgaagcatccgattcacattctgaa
ctatcaaatggaatttcagaggctgcatctttggagcaacgtcgagcttacaagatggag
cttcaggagggtatctctttgtttaatcggaagccgaagaagggaattgagttcctagta
aaagcgagcaaggttggggagtcaccagaggaaatagctgctttcctaaaaagtgcttct
ggcttgaacaagactatgattggtgattatttaggggaaagggaagatttatcactcaaa
gtcatgcatgcgtatgttgactcatttgagtttcaaggaatggagtttgacgaagcgatt
agagctttccttcaaggtttcaggttgcctggagaagctcagaagatcgaccggattatg
gaaaagtttgcagagcgttactgcaaatgtaacccaaaggccttttccagtgcggataca
gcctacgtccttgcttattcagtcataatgcttaacactgatgcacataacccaatggtc
aaaaacaagatgtcaccagaagatttcattaggaacaatcgcggtattgatgatgggaaa
gatttgcctgaagaatttatgagatccttgtatgaaaggatttggaaaaaggagattaag
atgaaagaagatgaatttgttccccagcagcaacaatcaacaagttctaacaaaattctt
gggttggataacattctcaacattgttgtacgcaagcgaggttcatctatggagacaagt
gatgatctcattaagcatatgcaggagcaatttaaagaaaaggcccgcatgtccgagtca
gtattttatccagccacagatgtagttgttttaaagttcatggttgaggtttgctgggct
cctatgcttgctgccttcagtgttccacttgaccagagtgatgatgagattgtcatatcc
caatgccttgaagggtttcgctctgcaatccatgttactgcagcaatgtcaatgaagact
caaagggatgcatttatcacttcacttgccaagtttacatcacttcactctgctgctgat
atcaggcagaaaaatgttgaagccattaaggcaattctattaattgcagatgaagatgga
aattacttgcaagaagcatgggagcatatattgacttgtgtttctcgttttgaaaatctt
catcttgttggagaaggagcgcctccagatgctacattctttgcgctgcagcagccagac
cttgataaatcaaaacaggccaagtcatcgattcttcctgttctgaaaaagaaggctcct
aatgctgcttcagcttctaaaaggggttcctatgacagcgctggtgtgggtggtaaagct
tctggtgttgatcaaatgaataatgaggtgacaagcctcttggagcaagttggaatggct
gaaatgaaccgtgtatttgtaagaagtcaaaagctcaacagtgagggtataattgatttt
gtaaaggctctctgtaaggtttctatggaggaattacggtctgcatctgatccacgagtt
tttagtctgactaaaatagtcgagatagcgcattacaatatgaaccgcatcaggcttgtc
tggtcaagcatatggcatgtcttgtctgatttttttgtgaccattggctgctcagaaaat
ctttcaattgcaatatttgctatggactccctacgacagttgtcgatgaagttcctggag
cgagaagagctggctaactacaatttccaaaatgaatttatgaagccttttgttgttgta
atgaggaagagccgagctgttgagatcagagaacttatcattaggtgtgtctctcaaatg
gtactagcccgtgtaaatcatgtaaagtcagggtggaagagcatgtttatggtctttgcg
acagcttcatatgatgatcacaaaaacattgtacttttggcctttgaaattatagaaaag
attttgcgggagtactttccatacatcactgagactgagtcaacgactttcaatgattgt
gtcaactgtctcatcgcatttactaacagcaggtttaacaaagacataagccttaatgca
attggctttcttcgattctgtgcggcaaagttggccgaaggtgatattggatcctcaagg
ttgaaggacaatcccacttcgaacagcaacccaccctcacctcatttggccagtgatggc
aagcaggaaggtgcagttcttaccgacaaggatgaccatatacacttttggtttccttta
ctagcagggttgtctgaacttaccttcgacttaagaccagaaatcagaaaaagtgctttg
caagtgttatttgacacattaagaaatcatggccatcttttctctttgcctttatgggag
aaggtgtttgattcagtgcttttcccaatatttgattatgtacggcatgctattgatcca
tctggtagttctccacaaggacaaagtgtggaaaacgatcctgcggaacttgatcaagat
gcttggctgtatgagacatgcactttggcacttcagctagttgtagatctctttgttagg
ttctatagcacagtcaatccacttctaaagaaggttctttcgctcctgactagtttcata
aagcgtcctcatcagagtcttgctggtataggtattgctgcattcgtccgtttgatgagc
agcgctggatccatgtttgtggatgaaaaatggctagaggtcgtattgtccatgaaagaa
gctgccaccgagacgcttcctgacttcacttatatttcatctggagcttacctgcaaaat
gtaccaacagaaaatggaggctcttctgaacagagagaagacgaatctcaaccattagag
aatgataatgaagaatcctctagatcaaggaacctatattttgcaattggcgatgccaag
tgtcgagctgctgtgcaactcctattgatccaggctgtgatggaggtatataacatgtac
agagcacaactgtctgcacagaatacagttatcctctttgaggccttacatgctgttgct
atccatgcccacaaaataaacagtgataacgacctgcggtccaagttgcaagagttgggc
tccatgacccaaatgcaggatccaccattgttgcgccttgagaatgagtcgtaccagctg
tgccttactatcctccagaacatattcctggacagcgcccctaaccatggaagcgcagaa
gtggtggagggtcaccttatcagcttgtgcaaggaggtccttgaggtatacttgaccaca
gcgcggcctgcccagctttccagtggcacccagtcactgggccactggcttatccctgtc
ggttcatcgaagcggagagagcttgcggcccgagcacccctggttgttgcaaccctgcaa
gctatcagtggcctaggtgattcatctttcgagaagaaccttggccagttcttccccctc
cttgctggcctcataagctgcgagcatggttcaattgaagtgcaggtggccttgagcgac
atgttcagcacttgggttggaccgctcgttcttcagtcttgctga
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integrated database retrieval system
