Panicum virgatum (switchgrass): 120646725
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Entry
120646725 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 6-like
KO
K03353
anaphase-promoting complex subunit 6
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120646725
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120646725
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120646725
03036 Chromosome and associated proteins [BR:
pvir03036
]
120646725
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
120646725
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
120646725
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120646725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
ANAPC3
TPR_14
TPR_12
TPR_7
TPR_19
ARM_TT21_4th
TPR_16
TPR_17
TPR_YpiA_C
TPR_10
CFAP70_TPR_C
TPR_11
RMD1-3
TPR_3
TPR_CcmH_CycH
CFAP70_mid_TPR
TTC22_N
TPR_YpiA
DUF1963
YpeD-like
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
120646725
NCBI-ProteinID:
XP_039779098
LinkDB
All DBs
Position
9K:complement(61508251..61516756)
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AA seq
587 aa
AA seq
DB search
MRDTNFGFPRVPPPSSSPAAAAAAASQPSPKRRRVGEAAEEPPPPPEMREEALERLRGVV
RDSIGKHLYASAIFLADKVAASTGDPADVYMLAQALFLGRHFRRALHLLNNSRLLRDLRF
RFLAAKCLEELKEWHQCLLMLGDAKVDEHGKVLDQDDGSDIYFDKDAEDHEINIKSAICF
LRGKAYEALDNRDLARQWYKAAIKADPLCYEALECLVDNYMLTCEEESELLSSLQFREED
GWLSAFYSCLIMKHEKEYVVEAKFKELERESCSISSSISGETLKNNTDVMACKAEYYHQS
GEYQKCWQLTSSLLERDPFHLKGTLVHLAAAMELGHSNDLYLLACNLVKDYPQKAISWFA
VGCYYYCIKKYDQARRYFGKATGLDGTFPPAWIGTGIAYAAQEEGDQAMAAFRTAARLFP
GCHLPTLYMGMQYVRMHNFKLAEQFFTQAKSICPSDPLIYNELGVVAYNMKEYRKAVQLF
ELTLDHTSSSLNEMWEPTLVNLGHALRKLKEYQTAVSYYEKALTFPTKSLSAFAGLAYTY
HLMDNFEAAINYYHKALWLKPDDQFCTDMLTYALESSCHSTARRSLV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacacaaatttcggtttccctcgcgtgccgcccccttcctcctcccccgcagca
gcagcagcagccgcatcccagccgagccccaagcgcaggagagtaggggaggccgccgag
gagccgccgccgccgccggagatgagggaggaggcgctggagcggctgcgcggggtggtg
cgggacagcatcgggaagcacctgtatgcgtcggccatcttcctcgccgacaaggtggcc
gcctccacgggggaccccgccgacgtgtacatgctcgcacaggcgctcttcctcggccgc
cacttccgtcgcgcgctccacctcctcaacaattcccgcctgctccgcgaccttcggttc
cgattcctcgccgccaagtgcctcgaggagttgaaagagtggcatcaatgtttgttgatg
cttggggatgcaaaagtggatgaacatggaaaggtcctcgatcaggatgatggcagtgac
atttattttgataaggatgctgaagatcatgaaatcaatatcaaatcagctatatgtttc
ttacgtggcaaggcttatgaagcactggacaaccgtgatcttgctcgccaatggtacaag
gctgccattaaagctgatcctctatgttacgaggctctcgaatgtcttgttgataactat
atgttgacctgcgaggaagagtctgagttattgtcctccctgcaattcagagaggaagac
gggtggctatcagcattttactcatgtttgattatgaagcatgaaaaagaatatgtagtt
gaagcaaaattcaaggaacttgaacgagaatcttgcagtatttcgtcctcgatttccggt
gaaacactgaaaaataacactgatgttatggcttgcaaagctgaatactatcaccagagt
ggggagtaccaaaaatgttggcaattgacatcttcgttacttgaaagggaccctttccat
ttaaagggcacgttagttcatttggcagctgcaatggagcttggtcattccaatgatctt
tatcttttggcgtgcaacttagtgaaggattatcctcaaaaggctatttcatggtttgct
gttggttgctattactattgcattaagaaatatgatcaagctcggagatacttcggcaaa
gctacagggttagatgggacatttcctcctgcctggattggtactggcattgcttatgct
gctcaagaggagggcgaccaagcaatggctgcttttcggactgcagctcggttatttcct
ggatgtcatctgccaactttatatatgggcatgcaatatgtgcggatgcacaatttcaaa
cttgctgagcagttcttcacgcaagcaaaatccatctgcccatctgatccacttatatac
aatgagttgggggttgtagcttataatatgaaagagtatcgaaaggcagttcagttgttt
gagttaacactggaccacacttcatcctctctgaatgaaatgtgggaaccaacattggtg
aatcttggacatgcacttcggaaactcaaggaatatcagacagcagtatcatattacgag
aaggcactcacttttccaaccaaaagcttgagcgcatttgctggtcttgcttatacttac
catcttatggataattttgaagctgccataaattattaccacaaggctctgtggttgaaa
ccagacgaccagttttgcacagacatgctaacatatgctctcgagtccagctgccacagc
actgctcgtagaagcctagtttag
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