Panicum virgatum (switchgrass): 120646809
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Entry
120646809 CDS
T07260
Name
(RefSeq) two-component response regulator ORR21-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120646809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120646809
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
120646809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
120646809
NCBI-ProteinID:
XP_039779218
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All DBs
Position
9K:complement(62548760..62554029)
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AA seq
687 aa
AA seq
DB search
MAATAEARGGDFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRR
GFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVR
MEELKNIWQHVVRKKFSENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKK
KREKEEDEADLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPG
LTRENVASHLQKFRLYLKRIAQHHAGIPHPFVAPASSAKVAPLGGLEFQALAASGQIPPQ
ALAALQDELLGRPTSSLALPGRDQSSLRLAAIKGNKPHGEREIAFGQPIYKCQNNAYGAF
PQSSPGVGGLPSFGAWPNNKLGTTDSPSALGNVSNSQNSNLLLHELQQQPDSLLSGTLHN
IDVKPSGIVMPSQSLNVFPASEGISPNQNPLVMPSQSQGFLPSIPPSMKHEPLLASSPSN
SLLGGIDMVNQASTSQPLISTHGANFPGLMNRSSNAMPSPGISNFQSGNNPYVVNQNAMG
VSSRPPGVLKTESTDPLSRSYGYGGSSSVDSGLLSSQSKNPQYGLLQNPNDVTGRWSPSQ
DIDSYGNTIGQGHPGSSSSNYQSSNAALGKLPDQGRGRNHGFVGKGTCIPIRFAVDEVES
PTNNLSHSIGSSADIVNPDIFEFSGQM
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacggcggaggcgcggggaggggacttccccgtggggatgaaggtgctggtg
gtggacgacgacccgacttgcctcgtcgtgctcaagaggatgctcctcgagtgccgatac
gacgtaacaacgtgtcctcaggctacaagagcactaactatgttgcgagagaataggcgc
ggttttgatgttataataagtgatgtccacatgccagatatggatggattcaggttactt
gaacttgtaggccttgagatggaccttccagttattatgatgtctgctgattcaagaacg
gatattgtaatgaagggaataaagcatggagcgtgcgactatttgataaaacccgtcaga
atggaggaattgaaaaacatctggcaacatgttgttaggaaaaaattcagtgaaaacaag
gatcatgagcattcaggtagcctagatgacactgatcgtaacagaccaactaataatgat
aatgaatatgcttcctctgcgaatgatggaggcgatggtagttggaaatctcagaaaaag
aaaagagagaaagaagaggatgaagctgatcttgaaaatggcgatccttcttctacatca
aagaaaccaagagttgtttggtcagttgagcttcatcaacaatttgtaaatgcagtcaat
caccttggaatagacaaagctgttccgaagaaaattttggagttgatgaatgtccctggc
ttaactagggaaaatgttgccagccatttgcagaaattcagactctatctgaagagaata
gctcagcatcatgcaggaatacctcatccatttgttgcgcctgcttctagtgctaaagtt
gccccactaggaggattggaatttcaagctttggctgcttccggtcagatccctcctcag
gctctggctgctttgcaggatgaactcctaggtcgacctacaagcagtttggcgttgcct
ggaagggaccagtcatccttacgactcgctgcaatcaaaggaaacaagccccatggagag
agagaaatagcatttggtcaacccatatacaagtgtcagaataatgcttatggggcattc
cctcaaagcagcccaggagttggaggattgccatcttttggagcttggccgaataacaaa
cttggtacgactgattcacctagcgcgttgggaaatgtgagcaattctcaaaatagcaat
ttgctattgcatgaattgcaacaacagccagactccttgctgtcaggaaccctccacaat
attgatgtcaaaccttctggcatagttatgccctctcaatcattaaatgtgttcccggct
agtgagggtatctcacctaatcaaaatcccttggtgatgccttctcaatcacaaggtttt
ctgccatccattcctccatccatgaaacatgaacctctccttgcatcttcaccatcaaac
agtctattgggtgggattgatatggttaatcaagcttcaactagtcagcctttgattagt
acccatggagcaaattttcctggtctcatgaaccgcagctcaaatgcaatgccttcacca
ggaattagtaattttcaaagtgggaataatccttatgtggttaatcagaatgctatggga
gttagctcaagaccaccaggtgttctgaagaccgagagcactgacccgctgagtcgtagt
tatggctacggtggcagcagcagcgtggactctggtttgctctcttctcagtccaaaaat
ccacagtacggtttattgcagaatccaaatgatgttacgggcaggtggtctccttcacaa
gatattgatagttatggaaatactattgggcaaggccaccctgggtcctcttcatctaac
taccagagttccaatgcggcccttgggaagttgcccgatcaaggacgagggaggaatcat
gggtttgttggcaaaggtacttgcattccaatccgctttgcagtggatgaggttgagtct
ccaactaacaacttgagccacagcattggaagcagtgcagacatagtgaatccggacatt
ttcgaatttagtggacagatgtga
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