Panicum virgatum (switchgrass): 120646815
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Entry
120646815 CDS
T07260
Name
(RefSeq) protein VAC14 homolog isoform X1
KO
K15305
vacuole morphology and inheritance protein 14
Organism
pvir
Panicum virgatum (switchgrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vac14_Fig4_bd
Vac14_Fab1_bd
HEAT
HEAT_EZ
HEAT_EF3_N
TOR1L1_N
Cnd1
CEP104-like_TOG
CLASP_N
HEAT_DAAF5
Arm
Motif
Other DBs
NCBI-GeneID:
120646815
NCBI-ProteinID:
XP_039779234
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All DBs
Position
9K:62628693..62642437
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AA seq
739 aa
AA seq
DB search
MAADALSIIPGAVLRNLSDKLYEKRKNAALEIEGIVKQLATAGEHEKISAVISLLINDFT
YSPQANHRKQGGLIGLAAVTVGLTSEAAQHLEQIVPPVLSSFLDQDSRVRYYACEALYNI
AKVVRGDFIIYFNKIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLL
RERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGNPSLSPSALLLLTVQQHFYR
YPPTPAGLFNMLSDSSHEIRQQADAALSEFLQEIKNSPNVDYGRMAEILVRRAGSTDEFT
RLTSITWINEFVKLGGEQLVPYYADILGAILPCISDEEEKIRVVARETNEELRAINADPA
EGFDIGAILSIGKRELNSEHEATRIEALHWFSTLLARYRVEFLAYLNDIFDPLLNALSDP
SDAVVLLVLEVHACIAEESHHFHHLVSYLIRTFHNNHVLLEKRGALIVRRLCVLLGAEKV
YREFSTILESEIDLDFASVMVQALNLILLTSTELGGLRSLLKKSLVDSCGKDLFQSLYAS
WRHSPMATISLCLLAQAYSHASCVIQSLGEEDINVKFLVQLDKLIRLLETPVFAYLRLQL
LEPGKHTWLLKTLYGLLMLLPQQSAAFKILRTRLKTVPFSENIKRTSSANPYSQILQVTE
DGNRNQDTQNYSAINFPSLLLQFENMQQQHRNHLKGQLQSRKSASAATLSQEIQRYEEAH
SSSLSEISRLPSGAPKGIS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgcgctctccatcatcccgggcgccgtgctgcggaacctctccgacaag
ctctacgagaagcggaagaacgccgcgcttgagattgaggggatcgtgaagcagctcgca
acggctggggagcatgagaagatttcagcggtcatctcgctgctcatcaacgatttcacc
tactcgccacaagcgaaccatcggaagcagggtgggttgattggcctcgcagcagttacc
gtcggactcaccagtgaggcagctcagcatctcgagcaaattgtgcctcctgtgcttagt
tctttcttggaccaagatagcagagtgcgctactatgcttgtgaagcactatacaacata
gcaaaggttgtaagaggggatttcatcatctacttcaacaagatttttgatgcgttatgc
aagctttctgcagattccgatgctaatgtgcagagtgcagctcatcttcttgacaggctt
gtcaaggatattgtaactgagagtgatcagttcagcattgaagaattcataccgctcttg
agagagcgcatgaatgtgttgaacccttatgtgagacaatttttggtgggttggataaca
gtgttggacagtgttcctgatattgacatgcttggtttccttcctgattttctcgatggt
aatccctccctttctccaagtgcattacttctattgactgttcagcaacatttctatcgc
tacccgcctacccctgcaggtttattcaatatgctgagtgattccagtcatgagataagg
cagcaagccgatgcagcactttcagagtttctgcaggagataaagaactcaccaaatgta
gattatggtcgtatggctgaaatacttgttcggagggcaggctctactgatgaattcact
cggttgacgtctatcacctggatcaatgagtttgtgaagcttggtggggaacaactcgtt
ccttactacgccgatatattgggcgccatcttaccatgcatatctgatgaggaggagaaa
atccgagtggttgcacgtgaaacaaatgaggaacttcgtgctatcaatgctgatccagct
gagggatttgatatcggagcaatcctttcaattggaaaaagagaattgaatagtgaacat
gaggccactcgaattgaagcattacattggttctccactctactggctcgataccgtgtt
gagttcttggcgtacctgaacgatattttcgatccacttctaaatgcactttctgatcct
tcagatgcggtcgtcctattagtattggaagttcatgcatgtatagctgaagagtctcac
cacttccatcatcttgtatcttacctaatccgcaccttccacaacaatcatgttctgctc
gagaagcgtggtgctttgatagtccgtcgactctgtgttcttcttggtgctgaaaaagta
tatcgggagttctccactattcttgagagtgaaattgaccttgattttgcatccgtcatg
gttcaggctttgaatttgattttgctcacatcaactgaacttggtgggctccgctctctt
cttaagaagtcattagtggattcctgtggcaaggacttgtttcagtctttatatgcttca
tggcgccactctccgatggctacaattagcttgtgtttgcttgctcaggcatacagtcac
gcaagctgtgttattcagtctctgggagaagaagacataaatgttaaatttttggttcaa
ttagataaattgatccgtctcttggagactccagtatttgcttacttgcgtttacagctt
cttgagcctggaaaacacacctggcttctgaaaactctttatggtctcctaatgctgttg
cctcagcaaagtgcagccttcaagatcttgaggactcgactgaaaactgtgccgttcagt
gaaaatattaagcgcacatcttcagcaaatccatactctcagattctgcaagtgacagaa
gacggcaatcgaaaccaagacacacagaactatagtgcaatcaatttcccatcccttctt
ctgcaattcgagaacatgcagcagcagcaccgaaaccatttgaagggtcaactgcaatcc
cgcaaatctgcttcagctgcaacattatcgcaggagatacaaagatatgaagaagcacac
tcctcttcgctatcagagattagcaggctcccatcaggagcacccaaaggcatttcatga
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