Panicum virgatum (switchgrass): 120646816
Help
Entry
120646816 CDS
T07260
Name
(RefSeq) glutamine synthetase root isozyme 5-like
KO
K01915
glutamine synthetase [EC:
6.3.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00220
Arginine biosynthesis
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir00910
Nitrogen metabolism
pvir01100
Metabolic pathways
pvir01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120646816
09102 Energy metabolism
00910 Nitrogen metabolism
120646816
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120646816
00220 Arginine biosynthesis
120646816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120646816
Enzymes [BR:
pvir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.2 glutamine synthetase
120646816
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120646816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gln-synt_C
Gln-synt_N
Motif
Other DBs
NCBI-GeneID:
120646816
NCBI-ProteinID:
XP_039779239
LinkDB
All DBs
Position
9K:62646286..62649497
Genome browser
AA seq
357 aa
AA seq
DB search
MASLTDLVNLNLSDCTDKIIAEYIWIGGSGIDLRSKARTVKGPITSASQLPKWNYDGSST
GQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRYNAAKIFSHPDVA
AEVPWYGIEQEYTLLQKDVNWPIGWPVGGYPGPQGPYYCAAGADKAFGRDVVDAHYKACI
YAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEMAGVVLSLDPKPIQ
GDWNGAGAHTNYSTKSMREPGGYEVIQKAIEKLGKRHAEHIAAYGEGNERRLTGRHETAD
INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTILWKGN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctcaccgatctcgttaacctcaacctcagcgattgcaccgacaagatcatc
gccgagtacatctggattggagggtccggcatagacctcaggagcaaagcaaggacggtg
aaaggccccatcaccagtgcgagccagctcccaaaatggaactacgatggctccagcacc
gggcaggctcccggagaggacagcgaagtcatcctctaccctcaagccattttcaaggac
ccgttcaggaggggtgacaacatccttgtgatgtgcgactgctacacgccacaaggcgag
ccaatccccactaacaagagatacaatgctgccaagatcttcagccacccggatgttgca
gctgaggtgccatggtacggtattgagcaggagtacactctccttcagaaggatgtgaac
tggcccattggctggcctgttggtggataccctggtccccagggaccatactactgcgct
gccggtgccgataaggcctttgggcgcgacgtcgtggacgcccactacaaggcctgcatc
tacgccggcatcaacatcagcggcatcaatggcgaagtcatgcccggccagtgggagttc
caagttggcccgtccgttgggatctctgccggcgacgagatatgggttgcccgctacatc
ctcgagaggatcaccgagatggccggagttgtgctgtccctcgacccgaagccaatccag
ggtgactggaacggcgccggcgcccacaccaactacagcaccaagtcgatgagggagccc
ggcggctacgaggtgatccagaaggcgatcgagaagctggggaagaggcacgcggagcac
atcgcggcgtacggcgagggcaacgagcgccgcctcacgggccgccacgagaccgccgac
atcaacaccttcaaatggggcgtggcgaaccgcggcgcgtccatccgcgtggggcgcgac
acggagaaggagggcaagggctacttcgaggaccgcaggccggcctccaacatggacccc
tacgtcgtcaccggcatgatcgccgagaccaccatcctgtggaagggaaactga
DBGET
integrated database retrieval system