Panicum virgatum (switchgrass): 120646825
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Entry
120646825 CDS
T07260
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 3-like
KO
K19891
glucan endo-1,3-beta-glucosidase 1/2/3 [EC:
3.2.1.39
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120646825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
120646825
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
120646825
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
Enzymes
120646825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
120646825
NCBI-ProteinID:
XP_039779248
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All DBs
Position
9K:complement(62772713..62776641)
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AA seq
500 aa
AA seq
DB search
MNKLLLVFFLFLLGVAAVHGEDGAYIGVNIGTAMSSVPAPTQITTLLRSQNIRHVRLYDA
DRAMLAALANTGIRVIVSVPNEQLLAIGNSNATAANWVARNVAAHFPAVNITAIAVGSEV
LSAQANAAPLLMPAMRYLQNALVAAALDRYIKISTPHSSSIILDSFPPSQAFFNRSLDNV
LVPMLKFLQSTGSPLMLNVYPYYDYMRSNGVIPLDYALFRPLPPNKEAVDANTLLHYTNV
FDAVVDAAYFAMSYLNVTNVPVMVTETGWPHKGDPSSEPDATAENADTYNSNLIRHVMNS
TGTPKHPGVAVPTFIYELYDEDTRPGSTSEKYWGLFDMNGVPAYTLHLTGSGVLLANDTT
NQTYCVAREDADPKMLQAALDWACGPGKVDCSALTQGQPCYEPDTVEAHATYAFNAYYHG
MGMGSGTCYFSGVAVITTTDPSHGSCVYAGKNGSALLNGTSLAPSSNSTEGGSGAHRAVG
DVSALARIVSAALLLSVLLL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctgctcttggtcttcttcctcttcctgctgggcgtcgcagcagttcatggt
gaagatggtgcctacatcggcgtgaacattggcacggccatgtcgtcggtgccggcgccg
acgcagatcacgacgctgctccgctcgcagaacatccgccacgtccgcctctacgacgcc
gaccgggcgatgctggcggcgctcgccaacaccggcatccgcgtcatcgtctccgtgccc
aacgagcagctgctcgccatcggcaactccaacgcgacggcggccaattgggtggcgcgc
aacgtggccgcgcacttccccgccgtcaacatcacggccattgccgtggggtccgaggtg
ctctccgcgcaggccaacgcggcgccgctgctcatgcccgccatgcgctacctccagaac
gcgctggtggccgcggcgctggaccgatacatcaagatctccacgccgcactcgtcgtcc
atcatcctcgactccttcccgccgtcccaggccttcttcaaccggtcgctggacaacgtg
ctggtgccgatgctcaagttcctgcagtccacggggtcgccgctcatgctcaacgtgtac
ccctactacgactacatgcgctccaacggcgtcatcccgctggactacgcgctgttccgg
ccgctgccgcccaacaaggaggccgtggacgccaacaccctgctgcactacaccaacgtc
ttcgacgcggtcgtcgacgccgcctacttcgccatgtcgtacctcaacgtcaccaacgtg
ccggtgatggtgacggagaccggatggccgcacaagggcgacccctcctccgagcctgac
gctaccgccgagaacgccgacacctacaacagcaacctcatccggcacgtgatgaacagc
accggcacgccgaagcaccccggcgtggccgtgccgaccttcatctacgagctgtacgac
gaggacacccggccggggtcgacttcggagaagtactggggcctgttcgacatgaacggc
gtcccggcgtacaccctgcacctgacgggctccggcgtgctgctggccaacgacacgacg
aaccagacctactgcgtggcgcgggaggacgcggacccgaagatgctgcaggcggcgctg
gactgggcgtgcggccccggcaaggtggactgctccgcgctcacgcaggggcagccgtgc
tacgagccggacaccgtggaggcgcacgcgacgtacgccttcaacgcctactaccacggc
atggggatgggctccgggacctgctacttcagcggcgtcgcggtgatcacgacgaccgac
ccaagtcatggatcctgtgtctacgctgggaagaacgggtcggcgttgctgaacggcacc
tcgctggcgccgtcgtccaactccacggagggcggctccggcgcgcaccgggcggtcggc
gacgtctcggctctcgcccgcatcgtctccgccgcgctgctcttgagcgtcctcctgttg
tag
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