Panicum virgatum (switchgrass): 120646848
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Entry
120646848 CDS
T07260
Name
(RefSeq) probable glucan 1,3-alpha-glucosidase
KO
K05546
mannosyl-oligosaccharide alpha-1,3-glucosidase [EC:
3.2.1.207
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00510
N-Glycan biosynthesis
pvir01100
Metabolic pathways
pvir04141
Protein processing in endoplasmic reticulum
Module
pvir_M00073
N-glycan precursor trimming
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120646848
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120646848
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.207 mannosyl-oligosaccharide alpha-1,3-glucosidase
120646848
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GFIT
Motif
Pfam:
Glyco_hydro_31_2nd
Gal_mutarotas_2
Glyco_hydro_31_3rd
DUF5110
Motif
Other DBs
NCBI-GeneID:
120646848
NCBI-ProteinID:
XP_039779272
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Position
9K:complement(62956959..62961047)
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AA seq
918 aa
AA seq
DB search
MDPPPRRPAAPLLLLLLLLAASSPAARAWKKDEFRNCNQTPFCKRARTRAPHSLDAPLSL
AAGSLSVSPDGSISAELSHPSRPRPLVLRLSALPPHALRLQIDEDYSAATPLHRRFHVPD
VLLPDLEARTLHLPEPKTAAGVSTVALSSDLDVVVKHDPFELTVRRAGSGDPVFSFNSHG
LFDFEPLRESKPEDETWEEHFRSHTDKRPRGPQSITFDVSFYGADFVYGLPEHGSTSLAL
RPTRGPGVEESEPYRLFNLDVFEYLHESPFGLYGSIPFMIGHGARASSGFFWLNAAEMQI
DVLAPGWDGATTLENGRIDTLWMAEAGVIDAFFFVGSEPKDVVKQYVSVTGAPAMPQQFA
TAYHQCRWNYRDEADVDGVDAGFDEHDIPYDVLWLDIEHTDGKRYFTWDHSAFPNPEEMQ
RKIANKGRKMVTIVDPHIKRDGSFHLHQEATEKGYYVKDANGNDYDGWCWPGSSSYPDML
NPEIREWWADKFSYESYKGSTPTLYIWNDMNEPSVFNGPEVTMPRDALHYGDVEHRELHN
AYGYYFHMATADGLLKRGEGKDRPFVLSRAFFAGTQRYGAVWTGDNSADWDHLKSSIPMV
LTLGLTGLPFSGADVGGFFGNPEPDLLVRWYQVGAFYPFFRGHAHHDTKRREPWLFGERR
TAIIREAIHVRYSLLPYFYTLFREASVTGIPVMRPLWLEFPYDKETYNNGEAFMVGSSLL
AQGIYEEGQKSVSVYLPGKESWYELRNGSPYKGSVSHKLQVLEDSIPSFQRGGTIVPRKD
RFRRSSTQMVNDPYTLVIALNSSNAAEGELYVDDGKSYDYQQGAFIHRRFVFADSKLTSL
NIAPDNLGKKKFTSDCVVERIIILGLRSGAKKAIIEPGNLEVEIELGPVSLRSGSSPVAP
TIRRPNVRIADDWRIRIA
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggatccgccgccgcggcggccagccgccccgctcctcctcctcctcctgctcctcgcc
gcgtcctcccccgccgcgcgcgcgtggaagaaggatgagttccgcaactgcaaccagacg
cccttctgcaagcgcgcgcggacccgcgccccgcactcgctcgacgcgccgctctccctc
gccgccggctccctctccgtctcccccgacggctccatctccgccgagctctcccacccg
tcccgcccgcggcccctcgtgctccgcctctccgcgctgcccccgcacgcgctgcggctc
cagatcgacgaggactactccgccgccacgccgctgcaccgccgcttccacgtccccgac
gtcctccttccggacctcgaggcccgcacgctccacctccccgagcccaagaccgccgcc
ggcgtctccaccgtcgcgctctcctccgacctcgacgtcgtcgtcaagcacgatccgttc
gagctgaccgtccgccgagctgggtcgggcgatcccgtgttctccttcaactcccacggc
ctcttcgacttcgagccgctgcgggagtcgaagccggaggacgagacctgggaggagcac
ttccggagccacacggacaagcgcccccgcggtccgcagtcgatcaccttcgacgtctcc
ttctatggcgccgacttcgtctacggtctcccggagcacggctccacctcgctcgccctc
cgtcccactcgcggcccgggggtcgaggagtccgagccgtaccgcctcttcaacctcgac
gtgttcgagtacctccacgaatcgcccttcggcctgtatggctcgatccccttcatgatt
gggcatggcgctcgggcgtcgtcaggtttcttctggctcaacgctgcggagatgcagatc
gacgtgcttgcaccaggttgggatggggccactaccctggagaatgggcggatcgacact
ctctggatggctgaggctggtgtcattgatgctttcttctttgttggttctgagccgaag
gatgtggtgaagcagtatgtaagtgtgacaggtgcacccgcaatgccacagcaatttgct
acagcgtatcaccaatgccgatggaactaccgagatgaggcagatgttgatggagtggat
gctggttttgatgagcatgatattccatatgatgtgctctggctcgacattgagcatact
gatgggaagcgctattttacatgggaccattcagccttccccaacccagaggagatgcag
cggaagatagcaaataaagggaggaagatggtgaccatcgtggatccccatatcaagcgg
gacggctcattccatctccaccaggaggcaacggagaaggggtactatgtgaaagatgct
aatgggaatgactatgatgggtggtgctggcctggatcatcatcgtatcctgacatgttg
aaccctgagatacgtgagtggtgggccgacaagttctcctatgaaagctacaagggatca
actccaacactgtacatttggaatgatatgaatgaaccatctgtcttcaatggtcctgag
gtcaccatgcctagggatgcactgcactatggagatgttgaacaccgagaattgcacaat
gcatatgggtactacttccatatggctactgcagatgggcttctcaagcgaggcgagggg
aaagacagaccgttcgttttgtcaagggctttctttgctggtactcagcgatatggtgca
gtttggacaggcgacaactccgcggactgggatcacctcaaatcttctattccgatggtt
ttaactcttggtcttactggcttgcctttctctggtgcggatgttggtggattctttgga
aatccagaacctgacctattggtgcgctggtaccaagtaggggccttttatcctttcttt
aggggtcacgctcatcatgacaccaagagacgcgagccatggttattcggagagcgaaga
actgccatcataagggaagcaattcatgtgcgatattcattgttgccctacttctacacg
ctgttcagagaggctagtgtaactggaattcctgtcatgcgtcctttgtggttagaattc
ccttatgacaaagaaacatataacaatggtgaggcgtttatggtggggtcaagcctttta
gctcaaggaatatatgaagagggccagaaatcagtgtctgtctaccttcctgggaaggag
tcatggtatgagttaaggaatggatctccatacaagggaagtgtgtcacacaagctacaa
gttctagaagatagcattcccagcttccaaaggggtggcacaattgtgccaagaaaggat
agattcaggcgcagttctactcagatggtgaacgatccatacaccctggtgatagccctc
aatagctcaaatgctgccgaaggcgaactctatgtggatgatgggaaaagttatgattac
cagcaaggggcattcatccatcgccgctttgtttttgcagacagtaagctaacttcattg
aatattgcacctgataatttgggtaagaagaaatttacaagtgactgtgtggttgaaaga
attataatccttggcttacgatcgggagcaaagaaggctattattgagcctggaaaccta
gaagtggaaattgaattaggtccggttagtttaagaagtggttctagtccggttgcacca
acaatccggaggcccaatgttcgcattgcggacgattggaggataaggatagcttaa
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