Panicum virgatum (switchgrass): 120646910
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Entry
120646910 CDS
T07260
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00450
Selenocompound metabolism
pvir00970
Aminoacyl-tRNA biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
120646910
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120646910
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120646910
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120646910
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
120646910
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120646910
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120646910
Prokaryotic type
Other AARSs
120646910
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
HVO_0758
Motif
Other DBs
NCBI-GeneID:
120646910
NCBI-ProteinID:
XP_039779377
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Position
9K:63535968..63559598
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AA seq
600 aa
AA seq
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MAAGRAFLGAPCSSLATGARRLAFASPPPRALAPALRRRVPCRCVASVSSTPDAASASEP
YVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLEKKVIFITGTDEHGEKIATSAEASG
RNPKEHCDAISSSYKMLWADLDIEYDKFIRTTDHKHEGVVNEFYSRVLSSGDIYRADYEG
LYCVNCEEYKDEKELAENKICPVHLKPCVARKEDNYFFALSKYQHKLEELLARNPDFVRP
SHRLNEVQGWIKSGLRDFSISRASVDWGIPVPNDTKQTIYVWFDALLGYISALLDDGEQG
SLQQAIDRGWPASLHLIGKDILRFHAVYWPAMLMSAGISVPDAVFGHGFLTKDGMKMGKS
LGNTLEPKDLVERFGADAVRYFFLREVEFGNDGDYSEERFINIVNAHLANTIGNLLNRTL
GLLKKNCKSTLAFDSIAAADGVPLRENVENLVYKAKHHYENIFLSSACESVLEIGNLGNL
YIDEQAPWSCFKKGGESAEKAAKDIVIILETMRIIAIALSPIAPSLSLRIYTQLGFTEDQ
FRVLRWEDTKWGGLKAGQVMMEPKPVFARIETETTEEAQASSKAAKGGKKKSPSKGLVEA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgggcgggccttcctcggcgccccctgctcctccctcgccactggtgcccgc
cgcctcgcctttgcttcgcctccgccccgggcgctcgcccctgcgctccgccgccgcgta
ccctgccgctgcgtggcctccgtctcctcgacccccgacgcggcctccgcttcggagccc
tacgtgctcaccacgccactctactacgtcaatgccccaccgcacatgggaagcgcctac
accaccatcgccgccgacgccatcgcccggttccagaggttgctagagaagaaggttata
tttattactggaacagatgaacatggtgagaaaatcgccacttcagcggaggctagtggt
agaaacccaaaggagcattgtgatgctatttcaagttcatataagatgctctgggctgat
ttagacatagaatacgacaagtttatccgcacaactgatcataagcatgagggtgttgtc
aatgaattctattctagagtattaagcagtggtgacatatatagagctgattacgaagga
ctttattgtgttaactgtgaggagtacaaggatgaaaaagagctggccgaaaacaaaatc
tgccctgtgcatttgaagccttgtgtagcaagaaaagaagacaactatttctttgccttg
tcaaaataccagcataagttggaagagctgctggcaagaaatcctgattttgtaaggcca
tcacatcgtttgaatgaggtccaaggctggattaaaagtggattaagagacttttctatt
tcccgtgcatctgtagactggggtattccggttccaaatgacaccaagcagacaatatat
gtgtggtttgatgctctattagggtatatttcagcattactagatgatggtgagcaggga
agtttgcagcaagctattgatcgtggttggcctgcttccctgcacttgatagggaaggac
atattgcggtttcatgcagtttactggccagccatgttaatgtcagcagggataagtgtt
cctgatgcagtttttggtcatggcttcttgacaaaggatggtatgaagatggggaagtca
ttaggcaacacacttgaaccaaaagatctggtagaaagatttggcgctgatgctgttaga
tacttcttcttgcgggaagtagaatttggcaatgatggggactattcagaagaacgcttt
atcaatatagtcaatgctcaccttgctaacacaattggaaacctccttaatcgcacactt
gggcttctaaaaaagaactgtaaatccacactagcgtttgactcaattgctgcagcagat
ggagtaccactcagagaaaatgtagaaaacctggtgtacaaggcaaagcatcactatgaa
aatatttttctgtcatcagcgtgtgaatctgttttagagattggtaaccttggaaacctg
tacatcgatgagcaagcaccatggtcctgtttcaagaaagggggtgagagtgctgaaaaa
gctgcaaaggatattgtaattattttagagacgatgagaataattgcaattgcgctatca
cctatcgccccaagcctttcgctgaggatttatacgcagcttggttttacggaagaccaa
ttcagggtattgagatgggaggatacaaaatggggaggcttaaaagcaggccaggtcatg
atggagccaaagccggtttttgcgaggattgaaactgagacgacagaggaagctcaagca
agttcaaaggctgcaaaaggtgggaagaagaaatcacccagtaaaggtcttgtagaagca
taa
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