Panicum virgatum (switchgrass): 120646959
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Entry
120646959 CDS
T07260
Name
(RefSeq) elongator complex protein 5-like isoform X1
KO
K11376
elongator complex protein 5
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120646959
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
120646959
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Gene cluster
GFIT
Motif
Pfam:
Elong_Iki1
Ipi1_N
Motif
Other DBs
NCBI-GeneID:
120646959
NCBI-ProteinID:
XP_039779450
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Position
9K:complement(64076569..64080541)
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AA seq
380 aa
AA seq
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MAEAVVRYFRDGRLDGEHAPALALEGSLQSCSLAAGAMLHVAAALASQAAAGKAQARGLV
VVALDRSPEVYLEFMRRRGLEANALNRCVRILDCYSDPLGWKQKFQNQQNQENRTKQFST
NKENITVFRDVKDIKKLMYSITELGGGFQGEGKRYFSIAVDSISSLLRHASVPSISVLLS
NLRSHEQVSSIFWLIQSDLHEPKVPRAFECLSTMVACVEPALVDPLCVESPGSLSALEQN
YSKAKFIVRLKRRNGRVKHFYEDLYVEGNDVKFDSAPASAEVNQSLVPKVQFNLELSEKE
RTDRANVVLPFEHQGKGEPIRIYDGRRSLPEGQLDPNLAPALVDEIVPKSGTAKGEIHYV
RDSDDEQPDSDEDPDDDLDI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggttgtgaggtacttccgggacgggcgcctcgacggagagcacgcgccg
gcgctggccttggagggatcactccagagctgctcgctcgccgcgggcgcgatgctccac
gtcgcggccgcactcgcctcccaggccgcggcagggaaggcgcaggccagggggttggtg
gttgtggcgctcgatcggagcccggaggtgtacttggaattcatgcggcggcgcggcctt
gaagcaaatgctttgaaccgatgtgttcgaatattggattgctattccgacccccttgga
tggaagcagaagtttcaaaatcagcagaatcaagagaacagaacaaagcagttctcaaca
aacaaagaaaacattactgtttttagagatgtgaaggatattaaaaaattgatgtactcc
attactgaacttggaggagggtttcaaggagagggcaaaaggtatttttcaattgctgtt
gactcgattagctctttgttaaggcatgcttcagtgccatcaatttcagtccttcttagt
aatcttcgaagccatgaacaagtatcctcaatcttttggctgatacaatcagacctccat
gaacccaaggtgccccgagcatttgaatgtctttcaactatggttgcttgtgtggagcca
gcacttgtagatcctctgtgtgtagaaagtcctggaagcttgtctgctctggagcaaaat
tattcaaaagcaaagtttattgtgcgccttaaaagacgaaatggacgggtgaagcatttt
tatgaggacttgtatgttgagggaaatgatgtcaaatttgattctgctcctgcaagtgca
gaagtgaaccaaagtctagtacctaaggttcagttcaatctggagctgtcagaaaaagag
cgcactgacagggcaaatgttgttcttccttttgagcatcaaggaaagggtgaaccaatt
cgaatatatgatggccgccgatccctacctgagggtcaactagacccaaacttagcaccg
gcccttgtggatgaaatagttcccaaatctggaactgcgaagggtgagatacattatgta
cgtgattcagatgacgagcaaccggactcggatgaagatccagatgatgacttggacata
tga
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