Panicum virgatum (switchgrass): 120646983
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Entry
120646983 CDS
T07260
Name
(RefSeq) zinc finger protein ENHYDROUS-like
KO
K25869
zinc finger protein IDD1/2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120646983
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120646983
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
120646983
NCBI-ProteinID:
XP_039779491
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All DBs
Position
9K:complement(64268448..64271453)
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AA seq
541 aa
AA seq
DB search
MEVEATPTAAVSSSGGAAQLPPPGPPAKKKRALPGMPDPDAEVIALSPKTLLATNRFVCE
ICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEPSCVHHDPSRALGDLTGI
KKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHVKTCGSREYRCDCGTLFSRRDSFITHRAF
CDALAEESAKARAEAPPAEDDGGSAAAVGPPPAAPPTQAPVPAAPGPLRQQPPPPPPAPP
HRADQRNEPETKAPEPTQFAPPLPSPAAAVPVLSHNSVTAANVSASSSSSVAGTSQGLIG
GMFAPSSMAPAPHFPDLGGGVGRPERAMPGKPPSLCLATDASSSIFSAPVAADRQQFAPP
PPPSPSPHMSATALLQKAAQMGATSSTSSFLRGLGLDASSSSPGASSSGQQHYHDAMQVS
LAETSLQQWPPRLEQEPAPVLSAGLGLSLPYDSTGAPVCLPELMMGQTSLFGGKPATLDF
LGLGVSPTGASASRGLPAFMQPIGGAVEIAGTGAGAAETFVAGRGPQATPWERNPSTSPI
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaggcgacgcccacggcggccgtgtcgtcttccggcggggccgcgcagctg
ccgccgcccggcccgcccgccaagaagaagcgtgccctccccggcatgccagatcctgac
gcggaggtgatcgcgctgtcgcccaagacgctgctggcgacgaaccggttcgtgtgcgag
atctgcaacaaggggttccagcgggaccagaacctgcagctccaccgccggggccacaac
ctaccgtggaagctccggcagcggagcggcaaggagccccggaagcgggtgtacgtgtgc
ccggaacccagctgcgttcaccacgacccgtcgcgcgcgctcggcgacctcaccggcatc
aagaagcacttctgccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaag
aagtacgccgtgcagtcggactggaaggcgcacgtcaagacctgcggctcccgggagtac
cgctgcgactgcggcaccctcttctccaggagggacagcttcatcactcaccgcgccttc
tgcgacgcgctcgccgaggagagcgccaaggcgcgcgcggaggcgcctcccgccgaggac
gacgggggctcggctgccgccgtcggtccgccaccggccgccccgccaactcaggcgcca
gtacctgccgcgccggggccgctgaggcagcaaccgcccccgccgccgcctgctcctcct
caccgtgcggaccaacgtaatgagccggagaccaaggcgcctgagcccactcagtttgcg
ccgccgctgccctctccggcggcggcggtgccggtgctttcgcataattcggtcacagct
gcgaatgtcagcgccagcagcagcagcagcgtcgcggggacatcgcagggcctgatcggc
ggcatgttcgcaccgtcgtcgatggccccagcgccgcatttcccggacctcggcggcggg
gtcggccgcccagagcgcgcgatgcctggcaagcccccatcactgtgcctcgccacggac
gcgtcgtcctcgatcttctcggcaccagtagccgctgaccggcaacaattcgcgccaccc
ccgccgccttccccgtcgccgcacatgtccgccaccgcgctgctccagaaggccgcgcag
atgggcgctacgtcgtcaacctcctcgttcctccgagggctgggcctcgacgcatcctcg
tcatcgccgggggcctcgtcgtccggccagcagcactaccacgacgccatgcaagtgtcg
ctcgcggagacgtcgctgcagcaatggcccccgcggctggaacaggagccggcgccggtg
ctgtcggccgggctcggcctcagcctgccgtacgactccaccggcgcgccggtgtgcctg
ccggagctcatgatgggccagacgtcgctgttcggcggcaagccggctaccctggacttc
ctggggctaggggtgagcccgaccggcgcgtcggcaagcagagggctccccgcgttcatg
cagcccatcggcggcgccgtcgagatagccggtaccggcgccggcgccgccgagacgttc
gtcgccggccgtggcccgcaggcgacgccgtgggagaggaatccgagcacctcgcccatc
ctgtag
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