Panicum virgatum (switchgrass): 120646985
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Entry
120646985 CDS
T07260
Name
(RefSeq) COP9 signalosome complex subunit 4 isoform X1
KO
K12178
COP9 signalosome complex subunit 4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120646985
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
120646985
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GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
CSN4_RPN5_eIF3a
DUF2408
Motif
Other DBs
NCBI-GeneID:
120646985
NCBI-ProteinID:
XP_039779494
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Position
9K:64277453..64282282
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AA seq
428 aa
AA seq
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MDSALASAAAIADQRQKIEQYRHILASVLSSSPPDIAQAKRFLDHSNALYSNSCCRFREI
LLSVGLIVGIGMNAVVSDEVPLVVSRQLLQTFAQDLGKLESDAQKEVAHYALTQIQPRVV
SFEEQVVVIREKLADLYESEQQWSKAAQMLSGIDLDSGIRMLDDTNKLSKCVQIARLYLE
DDDAVNAEAFINKASFLVTNSQQEVLNLQYKVCYARILDLKRRFLEAALRYYDISQIEQR
KIGDEEIDENALEQALSAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVYLE
RILRKPEIDAFAEELRPHQKALLPDKSTVLDRAMIEHNLLSASKLYTNISFDELGTLLGI
DPRKAEKIASRMIYEDRMRGSIDQVEAVIHFDDDTEELQQWDQQISGLCQALNDILDSMS
SKGIAIPV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgccctcgcgagcgcggcggcgatcgccgaccagcgccagaagatcgagcag
tatcgccacatcctcgcctccgtcctctcgtcttctccgccggacatcgctcaggccaag
cgcttcctggatcacagtaatgctctatattctaactcttgctgtagatttcgcgagatt
ttgctctccgttggcttaattgtaggaattggtatgaatgcagtggtgtccgatgaggtg
cctctcgtggtgtcgcggcagctgctgcagacgtttgcgcaggaccttgggaagctggag
tccgacgcgcagaaggaggtcgcccactacgcgctcacgcagattcaaccgcgcgtggtc
tccttcgaggagcaggttgtagtgattagagagaagcttgcagatctatatgaatctgaa
caacagtggtcaaaagcagcgcaaatgcttagtgggattgacttggactcaggaataaga
atgcttgatgacaccaacaaattatccaagtgtgtccagattgcgcgactttatttagag
gatgatgatgcagtgaatgctgaggcttttatcaacaaggcttcatttttggtcaccaac
agtcagcaggaagttctaaacttacagtacaaggtctgctatgcaaggattttggatcta
aaaagaagattcctggaagctgcccttcgatattatgatatctcccagattgaacagcgc
aaaattggagatgaagagattgatgaaaatgctctagagcaagctcttagtgctgccgta
acgtgcaccatattggctggtgctggtccacagcgctctcgtgttcttgctacgctgtac
aaggatgaaagatgctcaaagctgaagatatacccaatactgcagaaggtttatcttgaa
aggattttgaggaaaccagaaatcgatgcgtttgcagaggagttgaggccgcatcaaaaa
gctctattgccagataagtccactgtgcttgaccgggcaatgattgagcataatctcctt
agtgccagtaaactttacacaaatatcagctttgatgagcttggtacattattgggcatt
gatccaaggaaggctgagaagatagcatctcggatgatttatgaggatagaatgcggggt
tcaattgatcaggttgaagctgtgatacattttgacgatgacaccgaagagctacaacaa
tgggatcaacagatttctgggctgtgccaagctctgaacgacatccttgacagcatgtca
agcaaaggaatagctattccggtgtga
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