Panicum virgatum (switchgrass): 120647032
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Entry
120647032 CDS
T07260
Name
(RefSeq) calmodulin-binding transcription activator 1-like isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120647032
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
Others
120647032
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CG-1
IQ
TIG
Ank_2
Ank
Ank_4
Ank_3
TIG_plexin
Motif
Other DBs
NCBI-GeneID:
120647032
NCBI-ProteinID:
XP_039779566
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All DBs
Position
9K:64761407..64768820
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AA seq
1034 aa
AA seq
DB search
MAEARRYAIAPQLDVDQILKEAQHRWLRPAEICEILKNYRNFRIAPEPPNRPPSGSLFLF
DRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSIDVLHCYYAHGEENENFQRSYWMLE
EDFMHIVLVHYLEVKGGKSTSCIRGHDDMLQAARTDSPLSQLPSQTTEGESSVSGQATEY
EETESADIYSGGAGYHPFSWTQQRENGAGPVMGASILSSYIPALIVGNHQGFPATATSTD
LYSHGQDALPVALNEPALGIALNGADNQLDDLDPSSLNGLPDQGVHQMPPPLITDPSKRF
PFFEGPGIESFTFDEVYNGLGIKDADTVDTDEGSLWKLPGAISSFPTEDSFQQNGRSLVE
TINYPLLKTQSSDLSDILKDTFKKSDSFTRWMSKELGEVDDSQIRSSSGVYWNSEETDNI
IEASSCDQLDQFTVDPVLAQDQLFSISDFSPSWTYAGSKTRVLITGRFLNSDEVQRWKWS
CMFGEVEVPAEISADGTLRCYSPSHKPGRVPFYVTCSNRLACSEIREFEFRPSNSKHMDV
RSPHDDAKKTYLQMRLDDLLSLGQDEYQAIVSNPTKEMIDLSKKISSLMTDNDSWSELLK
LACDNELATDDKQDQFFENRLKEKLHIWLVHKPGDGGKGPSVLDEEGQGVLHLAATLGYD
WAIRPTISAGVSINFRDAHGWTALHWAAFCGRERTVVALIALGAAPGALTDPTPDFPTGS
TPADLASANGYKGISGFLAESALISHLQTLDLKETMGSNASEISGLPGIGDVIERRASPL
AGEGLLAGSMGDSLGAVRNAAQAAARIYQVFRMQSFQRKQAVQYEDENGAISDDRALSLL
SVKPSKPGQLDPLHAAATRIQNKFRGWKGRKEFLLIRQRIVKIQAHVRGHQVRKHYRKII
WSVGIVEKVILRWRRKGAGLRGFRPTEGAVEGTSSSHNDLIQNKPAQEDYDFLQQGRKQT
EERLQKALARVKSMVQYPDARDQYQRILTVVTRLQESQALQEKMLESSTDMDEGFVMSEF
QELWDDDMPTPGNT
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcggcgctacgcgatcgcgccgcagctagatgttgatcagatattgaag
gaagcacaacaccgatggttacgacctgcggagatttgcgaaatacttaaaaattacaga
aatttccgcattgccccagaaccaccaaatagacctccaagtggttcgcttttcttgttt
gatcgaaaagttttgaggtatttccggaaggatggccataattggaggaagaaaagagat
ggaaaaactgtcaaagaagctcatgaaagattaaaatctggaagtattgatgtgcttcac
tgctactatgctcatggggaagaaaatgaaaactttcagaggagttattggatgttggag
gaggattttatgcacattgtgcttgtacattacctcgaagtcaagggtggcaaatcaact
tcttgtattagagggcacgatgatatgctgcaagctgctcgtacggatagccctttaagt
cagctgccttcacaaactacagagggtgaaagctctgttagcggacaagccaccgaatat
gaggaaacagaatcagcagatatttattcgggaggagccggataccaccctttctcttgg
acgcagcagcgtgaaaatggagctggacctgtgatgggagcttctattctgagctcatac
attcctgcactgattgtaggtaaccatcaaggcttcccggctacagcaactagtacagac
ttatattctcatggtcaagatgccttaccagttgctcttaatgagcctgctcttggaatt
gcattaaatggggctgataatcagttggatgacttggatccatcatcattgaatggccta
cctgaccaaggggtccatcaaatgcctccacccctaattactgatccctccaaacgattt
cctttctttgaaggacctggaatcgaatccttcacgtttgatgaagtatataatggtttg
ggtattaaggatgcagatactgtagacactgatgaagggtcactgtggaagcttccaggt
gctatcagctcgtttcctacagaggacagttttcaacaaaatggtagatctttggtggaa
actatcaattaccctctcttgaaaactcaatcatctgatctctctgatatcctgaaagac
acctttaagaaaagtgatagttttacgagatggatgagcaaagaacttggtgaagtagac
gactcccaaattaggtccagttctggagtgtactggaacagcgaagagactgacaatatc
attgaagcatcaagttgtgatcagttggatcaattcactgttgacccggtgcttgcacaa
gaccagctgtttagtatatctgatttttctccaagctggacatatgcgggctccaagact
agggttctcattactggtagattcttaaattctgatgaggttcaaagatggaagtggtca
tgtatgtttggagaagtcgaagttccagcagagatttcagctgatggaactctcagatgc
tattctccgtcacacaaacctggcagggttcctttttatgttacatgctccaacaggttg
gcctgcagcgaaatccgagagtttgagttccgaccaagtaattccaaacacatggatgtc
cgaagtccacatgatgatgcgaagaaaacatatctccagatgcgtcttgatgacctgttg
tctttgggacaagatgagtaccaggcaatagtatctaaccccacaaaggagatgattgat
ttgagcaagaagataagctcgctaatgacagacaacgattcctggtccgagttgctaaag
ttggcttgtgataacgagcttgccactgatgataagcaggatcagttctttgaaaatcgc
ttgaaggaaaaattgcatatctggcttgtccacaaaccaggtgatggtggcaagggcccc
agtgtgttagatgaggaagggcagggtgtgcttcatctggcagctaccctaggatacgat
tgggctataaggccaacaatttctgctggtgtgagcataaatttcagagatgctcatgga
tggactgcactccattgggctgcattttgtggcagagagcgaacagttgtggcactcatc
gcacttggtgcagctcctggagctttgacagatccaacgccagattttcccacaggaagc
acaccagctgatcttgcgtcagctaatgggtacaagggaatttctggtttcctggctgag
tctgctttaataagtcatctccagaccctcgatcttaaggaaaccatgggaagcaatgcg
tcagaaatatccggtctgcctggtattggagatgttattgaaagaagagcatcaccatta
gcaggtgaaggtcttctagctggatccatgggagattcactaggagctgttcgaaatgct
gcccaagctgctgctcgtatatatcaagttttcaggatgcaatccttccagagaaagcaa
gcagttcagtacgaggatgaaaatggtgcgatatcagatgatcgtgccctgtcactctta
tctgttaaaccatctaaaccagggcagcttgatcccctacatgctgctgcaactcgaata
caaaacaagttccgtggatggaagggaagaaaggagttcctacttattagacagcgcatc
gtcaagatccaggctcatgtgcgaggtcaccaagtgagaaagcattatcgcaaaatcatt
tggtctgttggaatagtagagaaggttatattgcgctggaggcgaaagggggctggtttg
cgcgggtttcggcctacagaaggtgcggtggagggcactagcagcagccataacgattta
atccaaaataaacctgctcaggaggattatgatttcctgcaacaaggaaggaagcagacc
gaagaaaggctgcagaaagctcttgccagagtgaagtccatggttcagtacccagatgct
cgggatcagtatcagagaattctgactgtcgtcacaagactccaggaatcccaggctttg
caagaaaagatgcttgagtcgtctaccgatatggatgaaggtttcgtgatgagtgagttc
caagagctgtgggatgacgacatgccaacgcctggcaatacctag
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