Panicum virgatum (switchgrass): 120647062
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Entry
120647062 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120647062 isoform X1
KO
K23504
protein SERAC1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120647062
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120647062
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Gene cluster
GFIT
Motif
Pfam:
PGAP1
INTS5_N
DUF829
Motif
Other DBs
NCBI-GeneID:
120647062
NCBI-ProteinID:
XP_039779606
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Position
9K:complement(65110090..65116779)
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AA seq
1187 aa
AA seq
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MLRRVLLLRRLHHHRHRVRLLSTTPTPPASPAPSTPSTSSPLPIAATPPEEHHLAPRRGA
GRRLAPLLAFSALSLAAAGTVYLTADNLEETLRRSRDSAGRVVERMQHTLTAAGVLWKSL
LSVLSSANQEVRSGFELRVAALLADIAAASAARRAAIVSAGGGAVVDWLLDSVVRGGTQA
EAARALAHLVADPWVAPAVLGRPHAVPCLLQFIFSYQPTRGKKKSSFDGSDHSKGRSMLV
AALMDIITSNCDNADYSSFQPLLPADADTRDIAAVIEVIEQGGMHFDDHEDNSSSDGDRG
LKGIGIKVLGGTTILGFSRGNNSLELDNSDVDMLEVSHNSRRLVVQQTAVESTQVEKLSS
SAVPGLWDDLQREHVAVPFATWVLANWAIASDLNRTRIQDLDRDGHAVATALKAAERTVK
WHGALVARALLEDQNLALAPSVPDWCCSLLSTASQATENNDMPLGQLSLSTFLLSMTRCN
DSKFVIRKRGLHPLRSIAKKIENQNGQSSMKESIASALSLLYAGEVPLSLEESQRWSGIL
LRWIFDKSVSDKTQRTAVKILSCILEDYGPASVPISQGWLALILSEILGDNKAQNSKGTA
QPEPERVKNPVDYHNASTATQVLNQLGSAVVKLASAQSGYEPGSDEKDKVPLADFLSLEP
FATALKNLNKKNPPKFDAADSASATLKGIKALAELCSEDGACQKRIAGLGTLSLLRHILL
ADDYEKLAAIEAYDASRIREVQDKNVSASNVSSTDATTDPSSVRVAPAAHIRRHASRLLT
ILSLLPNSKKEIISDDVWCKWLEDCASGRIPCNDIKLKSYCRLTLLNILCSESLNTRRGL
DEYPDSESEYKRNCPQFGDALFLLNPELPLEVHLDNSGFRISTVRRDNCKDDEGIEDSSE
TGSSVDGTEASSKEAPLMDVVFVHGLRGGPFNSWRIADDKSSTTKAGLVESIDEDAGKEG
TCWPREWLAADFPQARFFTVKYKTNLTQWTGASLPLQEVSSMLLRKMVAAGIGNRPVIFV
THSMGGLVVKQLLYQAKLNNYDNFLNNTVGLVFYSCPHFGSKLADMPWRMGLVFRPAPSI
GELRSGSPRLVELNDFVRQRHNKGLLDVLSFSETQVTPIVEGYGGWALRMEIVPIESAYP
GFGELVVLPSTDHINSCKPVNKNDPSYAETLSFLEKNFKLRLKGAES
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgacgcgtcctcctcctccgccgtctccaccaccaccgccaccgagtccgcctg
ctctccaccaccccgactccgcccgcatcccccgcgccctccaccccttccacctcctcc
cccctcccgatcgccgccacgccgccagaggagcatcacctcgcgccccgccgaggggcc
gggcgccgcctggcgccgctcctcgccttctccgcgctctccctcgccgccgcgggcacg
gtctacctcaccgccgacaacctcgaggagacgctgcgcaggtccagggattcggcgggc
cgcgtcgtggagcggatgcagcacacgctgacggccgcgggagtgctctggaagtcgctc
ctgtccgtgctctcctcggccaaccaggaggtgcggtccgggttcgagctgcgggtggcc
gcgctgctcgccgacatcgccgccgccagcgccgcccggcgcgccgccattgtctccgcg
gggggcggcgccgtcgtcgactggctgctcgacagcgtcgtgcgggggggcacgcaggca
gaggctgccagggcgctcgcgcacctggtggctgacccctgggtcgcgcccgccgttctc
gggcgcccgcacgccgtgccctgcctcctccagttcatcttctcgtatcagcccacgcgc
ggcaagaagaaatcttcattcgatggttcagatcattctaaagggaggagcatgcttgtg
gctgcacttatggatatcatcacttcgaactgcgataatgcagactactcgtcgtttcag
cctttgctgcctgcggatgctgatacaagagatattgcagcagtaattgaagtcattgag
caaggagggatgcattttgatgaccatgaggataacagcagcagtgatggtgatagagga
ttaaaagggatagggattaaagtgcttggtggaaccactatattgggattctctagagga
aataattccttggagttggacaactcagatgttgatatgctggaagtttcacataacagt
agaagattagtggtgcaacagactgcagttgagtctacacaagttgagaaattaagttcg
tctgctgtcccaggcctctgggatgacttgcagagggagcatgtagctgtaccttttgct
acatgggttcttgcaaactgggctatagcatcagatctgaatcgcactcgtattcaagat
cttgatagagatgggcatgcagttgcaactgcgctgaaagcagctgaaagaactgtcaag
tggcatggagctcttgtggctcgagctcttttagaagaccagaatttggccttggctcca
tcagttcctgattggtgctgtagtcttctttctacagcttctcaggctactgagaacaat
gacatgccattgggtcaactgtcattatcaactttcctactgtccatgacacggtgtaat
gactcaaaatttgtgataaggaagaggggccttcatccacttcgtagtattgcaaaaaag
atagaaaaccagaatggccagagcagtatgaaagaatcaatagcaagcgcactgagtttg
ctttatgctggtgaagttcctttatcacttgaggaatctcaaagatggtctggcattctt
cttaggtggatttttgataaatctgtatcagataaaacacaacgtacagctgtaaaaatc
ctttcatgcatacttgaagactatggtccagcttctgtgccaatttctcagggatggtta
gctcttatcctttctgaaattcttggagacaacaaggcccaaaattcaaaaggaaccgca
cagcctgaaccagagagggtgaagaatccggttgattaccataatgcttccactgcaact
caggtcctgaatcaattaggtagcgctgttgttaaattggcaagtgctcaatcaggctat
gaacctgggtctgatgaaaaagacaaagtaccacttgccgattttctatctcttgaacca
tttgctacagctctaaagaatttgaacaaaaagaatccacccaaatttgatgctgctgac
tcagcatcagctacactcaagggaataaaagctctagctgagctttgttctgaggatggt
gcatgccaaaagagaatagctggtttaggaactctttccttgttgaggcatatcctcctg
gctgatgattatgagaaacttgctgcaattgaagcatatgatgcatcgcgtattcgagaa
gtgcaggacaagaatgtttctgcttccaatgtttcctctactgatgctaccactgatccc
tcaagtgtacgggttgctcctgccgctcatatccgaaggcatgcgtcccggctgctgacc
attctatctcttctacccaattcaaagaaggaaatcatttcagatgatgtatggtgcaag
tggctcgaggattgtgctagtgggcgaattccctgcaatgatataaagttaaaaagttat
tgcaggttaacattattgaatatactctgctctgagagtctaaatactagaagaggcttg
gatgaatatcctgattcagaaagcgagtataaaagaaactgtcctcagtttggagatgca
ctattcttactaaatccagagttacctcttgaggttcatttggacaatagtggttttagg
atttcaacagttcgaagagataattgtaaggatgatgaaggtattgaagactctagtgaa
actgggagctctgtagatggtacagaggcttcatccaaagaggcccctttgatggatgtt
gtgtttgtccatggcttgcgtggtggcccattcaattcatggcgaatagccgatgacaaa
tcatcaactaccaaagctggtttggtagaaagcattgacgaagatgctgggaaagagggt
acatgttggccaagagaatggctcgcagcagattttcctcaagcacgtttttttacagtc
aaatacaagacaaatttgacccagtggactggagccagcttgccccttcaggaggtgagc
tctatgctgctgaggaaaatggtggctgctgggattggtaatcggcctgttatttttgtg
acacacagtatgggaggactggtggttaagcagctgttatatcaagcaaagctgaataac
tatgacaatttcctcaataatactgttgggctagttttctatagctgtccgcattttggc
agtaaacttgcagatatgccatggcgtatggggttggtgtttcgcccagctccttcgatc
ggggaattaagaagtggatctccaagactagttgaattaaacgattttgtgcggcagcgc
cataacaaaggacttctcgatgttcttagctttagtgagacccaggtcacaccgattgtt
gaaggctatggtggttgggcacttcggatggagatagtaccaattgagtccgcataccct
ggttttggggaactcgttgttctaccgtccactgatcatataaattcatgcaagccagtg
aacaagaacgatccttcttatgcagaaaccttgtcatttctggagaagaacttcaaattg
cgactcaagggagcagaatcctag
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