Panicum virgatum (switchgrass): 120647103
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Entry
120647103 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA synthase 10-like
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00062
Fatty acid elongation
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04626
Plant-pathogen interaction
Module
pvir_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
120647103
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120647103
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
120647103
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
120647103
NCBI-ProteinID:
XP_039779664
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Position
9K:complement(65455465..65459567)
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AA seq
540 aa
AA seq
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MAREQALLSTEIVNRGVEPSGPDAGSPTFSVRVRRRLPDFLQSVNLKYVRLGYHYLISHG
VYLATIPVIVLVCGAELGSLSRDELWAKVWGEATYDLATVLAFLAVLAFTISVYIMSRPR
PVYLIDFACYKPADELKVSKAEFIELARKSGKFDEESLAFQSRLLAKSGIGDESYMPRSV
FEPNANCATMKEGRAEASTAMFAALDELFDKCRVRPKDVGVLVVNCSLFNPTPSLSAMIV
NHYKMRGNILSYNLGGMGCSAGVIAVDLARDMLQASGAGLAVVVSTEAVSFTWYPGKRRS
MLIPNAFFRAGCAAVLLSNRRRDFHRAKYQLEHVVRTHKGADDRAFRSVYQEEDEQRIKG
LSISRDLLEVGGHALKTNITTLGPLVLPFSEQLLFFAGVLFRHLFPSKASAPPPGQEASA
AAAPYIPDFKRAFEHFCMHAASRDVLEHLQANLGLRDADLEASRAALHRFGNTSSSSIWY
ELAYLEAKGRVRRGDRVWQLAFGSGFKCNSAVWRAVRRVRRPARSPWLDCIDSYPARMDA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggagcaggcgctgctgtcgacggagatcgtgaaccgcggcgtggagccgtcg
ggcccggacgccgggtcgccgaccttctcggtgcgcgtgcgccgccgcctgccggacttc
ctgcagtcggtgaacctcaagtacgtgcggctcgggtaccactacctcatcagccacggc
gtgtacctggccaccatccccgtcatcgtgctggtgtgcggcgccgagctgggcagcctc
agccgcgacgagctctgggccaaggtgtggggggaggccacctacgacctcgccaccgtg
ctcgccttcctcgccgtcctcgccttcaccatctccgtctacatcatgtccaggcccagg
cccgtctacctcatcgacttcgcgtgctacaagcccgccgacgagctcaaggtgtccaag
gcggagttcatcgagctggcgcgcaagtcgggcaagttcgatgaggagagcctggcgttc
cagtcgcggctgctggccaagtccggcatcggcgacgagtcgtacatgccgcgctccgtg
ttcgagcccaacgccaactgcgccaccatgaaggagggccgcgcggaggcctccacggcc
atgttcgcggcgctggacgagctcttcgacaagtgccgcgtccgccccaaggacgtgggc
gtgctggtggtcaactgcagcctcttcaacccgacgccgtcgctgtcggccatgatcgtc
aaccactacaagatgcgcggcaacatcctgagctacaacctcggcggcatgggctgcagc
gccggcgtgatcgccgtcgacctggcccgcgacatgctgcaggccagcggcgcggggctg
gccgtggtggtgagcacggaggccgtctccttcacgtggtacccggggaagcggcggtcg
atgctgatcccgaacgccttcttccgcgccgggtgcgccgccgtgctgctgtccaaccgg
cggcgcgacttccaccgcgccaagtaccagctggagcacgtggtgcgcacgcacaagggc
gccgacgaccgcgccttccggtccgtgtaccaggaggaggacgagcagcggatcaagggc
ctgtccatcagccgcgacctgctggaggtgggcgggcacgcgctcaagaccaacatcacc
acgctgggcccgctggtgctgcccttctcggagcagctgctcttcttcgcgggggtgctg
ttccgccacctgttcccgtccaaggcctcggcgccgccgccggggcaggaggcctccgcc
gccgccgcgccctacatcccggacttcaagcgcgcgttcgagcacttctgcatgcacgcg
gcgagccgcgacgtgctggagcacctgcaggccaacctggggctgcgcgacgccgacctg
gaggcctcccgcgccgcgctgcaccgcttcggcaacacctccagcagcagcatctggtac
gagctggcctacctggaggccaagggccgcgtccgccgcggcgaccgcgtctggcagctc
gccttcgggtccgggttcaagtgcaacagcgccgtgtggcgcgccgtgcgccgcgtgcgc
cgcccggcgcgcagcccgtggctcgactgcatcgacagctacccggcgcgcatggacgcc
tag
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