Panicum virgatum (switchgrass): 120647113
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Entry
120647113 CDS
T07260
Name
(RefSeq) proteasome subunit alpha type-6-like
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120647113
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120647113
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120647113
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
120647113
Peptidases and inhibitors [BR:
pvir01002
]
Threonine peptidases
Family T1: proteasome family
120647113
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
120647113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
120647113
NCBI-ProteinID:
XP_039779671
LinkDB
All DBs
Position
9K:65522088..65524914
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AA seq
246 aa
AA seq
DB search
MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSVGVTSIGVRGEDSVCVVTQKKVPDKL
LDQTSVTHLFSITKFVGLLATGLTADARSLVAQARNEAAEFRFKWGYEMPVDVLAKWIAD
KAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLE
KKMKDDPKFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRALTTEEIDQHLT
AISERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcggcacaggcgcgggctacgaccgccacatcaccatcttctcccccgagggc
cgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggtgggggtcacgtcgatc
ggcgtccgcggcgaggactccgtatgcgtcgtcacccagaagaaagtgccggataagttg
ctggatcagacgagcgtgacgcacctgttctcaatcaccaagttcgtcggattgcttgcc
actggccttacagctgatgcaaggtcgttggttgcccaagcaaggaatgaagcagctgag
tttcgcttcaaatggggttatgagatgcctgtagatgtgttagcgaaatggatcgctgac
aaagcgcaagtttacacgcagcatgcctacatgagaccccttggcgtagttgctatggtc
ttgggctatgacgaagagaaaaatgctcaactcttcaagtgtgaccctgctggtcacttc
tttggacacaaggcaactagtgccgggcttaaggagcaagaagcaataaattttcttgag
aagaaaatgaaggatgatccaaaattcacctatgacgaaactgttcagattgcaatctct
gcgttgcaatcagttctccaggaagatttcaaggccactgagatcgaggttggtgttgtg
aggaaagaagaccgtgttttcagagcgctcacaacagaggagatcgatcagcacctgacg
gccattagtgaacgggactga
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integrated database retrieval system
