Panicum virgatum (switchgrass): 120647116
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Entry
120647116 CDS
T07260
Name
(RefSeq) cation/calcium exchanger 4-like
KO
K13754
solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120647116
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
120647116
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
120647116
NCBI-ProteinID:
XP_039779679
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Position
9K:65539177..65541563
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AA seq
638 aa
AA seq
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MIASQPRRVRPLAAVSLVLFLLLLYSRSDGGSSRSPGFLSSGLRPAHRRFLSDADPADPA
PSGANLSEVATLNGEQPEDPSVACAGIARHEGFQTQCEFLRAHPHCSSGGFVDYLGFFYC
RCERFRVLGYAVLGVCLAALFYMLGNTAADYFCCSLEKMSALLRLPPTVAGVTLLPFGNG
APDVFASIAAFMGSGAGDVGLNSVLGGAVFVTCVVVGAVSLCVAEKNVQIDRRCFVRDVG
FFLVTLVVLSVVLIVGKVTVWGAMMFVSIYAIYAFVVAANEVLRKHARRLKFDVVTPLLP
VRGSIFEQGTEEDESVYSSLLVEDADGEASQINTSLPQWMWASHVAIYSNHATGVGSPDS
SRPLWGWSEGEADTTTPNISKLFLFMELPLTIPRRLTIPIVVEDRWSKEYAVASACLAPV
LLAFLWSSQDGVSTKASIAAYMIASILGIGLAALAFLFTSSERPPRRFLFPWVFGGFVMS
IIWFYIVANELVALLVALGMILGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIA
MSGCYAGPMFNTLAGLGLSMLLGAWSTAPSSYVLPQDRSLIYTMGFLVAGLMWALVMLPR
GDMRPNKILGIGLIALYSGFLFIRVSNAMGILPLPGLS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgtcgcagccgcgccgggtcaggcccctcgccgccgtctccctggtgctattc
ctcctcctcctgtacagtcgctccgatgggggctcgtcgcgctctccagggttcctcagc
tccgggttgcgcccggcgcaccgcaggttcctctcggatgccgatcctgccgaccccgca
cccagcggcgcgaacctttcggaggtcgctacgctgaacggcgagcagccggaggatcct
tccgtcgcgtgcgctggcatcgcgcggcacgaggggttccagacgcagtgcgagttcctc
cgggctcatccccattgcagctccggcgggttcgtggactacctaggcttcttctactgc
agatgcgagaggttcagggtgctgggctacgccgtgctcggggtgtgcctggcggcgctg
ttctatatgctgggtaacactgccgccgactacttctgctgcagtctcgagaagatgtca
gccctgttgcggctcccgccgacggtggctggtgtgacgctgctcccctttggtaatggg
gctcctgacgtgtttgcaagcattgcggcgtttatggggagcggcgcaggtgatgtgggg
ctgaatagcgtgttgggtggagccgtatttgtgacttgcgtcgtggttggggcagtgtcg
ctgtgtgtcgcagagaagaatgtgcagattgataggaggtgcttcgtgagggatgttggg
ttctttcttgttactctggttgtgctgtctgtagtgttgatcgttgggaaggtgactgtt
tggggagctatgatgttcgtgtcaatttatgcaatctatgcatttgtggtggctgcaaat
gaggtattgaggaaacatgcccggaggctgaagtttgatgtggtcacacctttgctgcct
gtgaggggaagtatctttgaacaaggaacagaggaggatgagtcagtgtacagttcactt
cttgtggaggatgcagatggtgaagcttcccaaataaatacatccttacctcagtggatg
tgggcttctcatgtggccatctactcaaatcatgcgactggagtcggttcccctgatagc
tcaagaccattgtggggttggagtgaaggagaagcggataccaccacgcctaatatctcc
aagttgtttttgtttatggagctgcccttgacgataccaaggaggttgacaattccaatt
gttgtggaagaccgctggtcgaaagagtatgctgttgcaagtgcttgcttggcacctgtt
cttttggcgtttctgtggagcagtcaggatggggtttccaccaaagctagcatagcagca
tatatgatagctagcattttggggattggactagctgctctggctttcctgttcaccagt
agtgaacgccctccacggagatttttgttcccttgggtttttggagggtttgtgatgagc
atcatttggttctacatcgtcgctaatgaactcgttgcacttttggttgctttgggtatg
atattggggatcaatccttcaattcttgggttaacagttctagcatgggggaattcaatg
ggtgacttaatgtcaaatgttgctctggcgatgaatggaggtgatggagtgcagattgct
atgtctggatgttatgctggacctatgttcaatacacttgctggtttgggactatcgatg
cttctcggagcatggtcaacagcacccagttcgtatgttcttccacaagaccgctctctt
atttacacaatgggctttcttgtcgctggattgatgtgggctcttgttatgctgccgcga
ggtgacatgcggcctaacaagatacttggaattggcctaattgctctttactcaggtttt
ctttttattagggtaagcaatgctatggggatattgccactacctggcttgagttag
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