Panicum virgatum (switchgrass): 120647149
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Entry
120647149 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120647149
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120647149
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120647149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_16
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zinc_ribbon_16
zf-C3H2C3
zf-ANAPC11
TraI_C
zf_RING_Vps8
Prok-RING_4
RINGv
Motif
Other DBs
NCBI-GeneID:
120647149
NCBI-ProteinID:
XP_039779733
LinkDB
All DBs
Position
9K:complement(65881667..65886030)
Genome browser
AA seq
249 aa
AA seq
DB search
MNSSRQMELHYINTGFPYTVTESFMDFFEGLTYAHADFALTDGFQDQGNPYWAMMHTNSY
KYGYSAPGNYYSYAHVYDIDDYMYRADGGRRIWDNTTPVNNVDSANVVLQGGEASRTTAN
STTEECIQQAHQTPGSPQVVWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQERISLLPVT
KYKCGFFSRKKTRRERCVICQMEYRRGNLQMTLPCKHVYHASCVTRWLSINKVCPVCFAE
VPGEEPKRQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagtcgacaaatggaactccactacataaacactggatttccgtacactgtt
accgagagctttatggatttctttgaaggtctcacctatgctcatgctgactttgctctt
accgatggctttcaggatcagggtaatccatactgggcaatgatgcatacaaactcgtac
aagtatggatattctgctccagggaactattacagttacgcccatgtctacgacatagat
gattacatgtatagagcagatggtgggcgcagaatatgggataacactacacctgtaaac
aatgtagactctgccaatgttgtactgcagggtggtgaagcttcccgtacaactgcaaat
tctactaccgaggaatgcatccaacaggcacatcaaactccgggtagtcctcaggttgtt
tggcaagataacattgaccctgacaatatgacatatgaggaattgttggacttgggagag
gcagttggaacccagagccgtggtctctcccaagaacgcatttcattgcttcctgtcaca
aagtacaagtgtggtttcttttcaaggaagaaaacacgccgtgaaaggtgtgtgatttgc
caaatggagtacaggagaggaaatttgcagatgacgcttccctgcaagcatgtataccac
gccagctgtgtgacaagatggcttagcataaacaaggtatgcccagtttgcttcgccgaa
gttcctggcgaggaacccaagaggcaatga
DBGET
integrated database retrieval system
