Panicum virgatum (switchgrass): 120647150
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Entry
120647150 CDS
T07260
Name
(RefSeq) beta-catenin-like protein 1
KO
K12864
beta-catenin-like protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120647150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120647150
Spliceosome [BR:
pvir03041
]
Complex B
Other components
Prp19 complex
120647150
Complex C
Prp19-CDC5 complex
120647150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNBL
ARM_ARMC5
DUF6857
SEN1_N
CCDC138_C
Cas_Cmr5
PH_23
Motif
Other DBs
NCBI-GeneID:
120647150
NCBI-ProteinID:
XP_039779738
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All DBs
Position
1K:complement(56551176..56554368)
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AA seq
514 aa
AA seq
DB search
MDAAAAAVHKRKRPDESAPAAADVDLSAADAVEVLDLRAAKRLLLAFERRLRDNLEARMK
YPDDPARFADSEIALHAETDRLRLLAGAPELFPDLVPIGLASSLASLLTHDNADLTAAAA
SLLADLTDSDDPSDLPAVQALADALVDANALDLLVHNLSRFSEADPDEAEAVHNTLAVLE
NLLDLRPNLADKVCDGTKLLRWLLSRLKAREFDANKQYASEILAILLQNSPANQKRLGQI
NGVDGLLQAVAMYKSRDPKTSDEEEMLENLFDCLCCVLMPLENKERFVKAEGVELMIIIM
KQKKLAYSSAIRTLDFAMTRFPPACERFVDVLGLKTAFAAFMGKIPANKKNKKESYQEEL
EERIISIIASLFGGITKGSRRMRLLGKFVENECEKIDRLMEFYTRYSDRVKEETERLDSL
DLEDLEMDDDERYNRKLEAGLYTLQLIALILGHIWHSGDSQMRARVELLLRQNKLTKQDV
KDILEEYHDNIGDLDGPEEKERAQARTKEIIAVL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccgccgccgccgtccacaagcgcaagcggcccgatgagtccgctcccgcc
gccgcggacgtcgacctctcagccgctgacgccgtggaggtgctcgacctccgggccgcc
aagcgcctcctcctggccttcgagcgccgcctccgcgacaacctcgaggctcgcatgaag
taccccgacgaccccgctcgcttcgccgactccgagatcgctctccacgccgagaccgac
cgcctccgcctcctcgctggcgcccccgagctcttccccgacctcgtccccatcggcctc
gcctcctcactcgcctccctcctcacccacgacaatgccgacctcaccgccgccgccgcc
tccctcctcgccgacctcaccgactccgacgacccatccgacctccccgccgtccaggcc
ctcgccgacgccctcgtcgacgccaacgccctcgacctcctcgtccacaacctctcccgc
ttctccgaggccgaccccgacgaggccgaggccgtccacaacaccctcgccgtactcgag
aacctcctcgacctccgccccaacctcgccgacaaagtctgcgacggcaccaagctcctg
cgctggctcctctcgcgcctcaaggcacgcgaattcgacgccaacaagcagtacgcctcg
gagatcctcgccatcctcctgcagaacagccctgccaaccagaagcgcctgggacagatc
aacggggtcgacggcctgctccaggcagttgccatgtacaaatccagggacccaaagacc
tcagacgaggaggagatgctcgagaacctctttgactgtctctgctgcgtgctcatgccc
ctggagaacaaggagaggtttgtcaaggctgaaggcgttgagctcatgatcatcatcatg
aaacagaagaagctggcatatagctctgccatccgcacgctcgatttcgccatgaccagg
ttcccgcctgcatgcgagcgctttgttgatgtgcttggccttaagactgcctttgcagcc
ttcatgggtaagattcctgcaaacaagaagaacaagaaagagagttatcaggaggagcta
gaagaacgtatcatttcaattattgcctcattgtttggtggtattaccaagggctcacga
aggatgaggctactaggaaaatttgttgagaatgaatgtgaaaagatagaccgtctgatg
gagttttacacaaggtattcagacagagtgaaagaagagaccgagagacttgatagtctt
gatttggaagatctagagatggacgatgatgagcggtataaccgaaaacttgaagctggc
ctttacacactgcagttaattgcacttattctgggacacatctggcactctggggattcc
cagatgagggcaagagttgaattgcttctaagacaaaacaaacttacgaagcaagacgtg
aaggacatacttgaggagtaccatgacaacattggggacttggatggacctgaagagaag
gaaagagctcaagcacggaccaaggagattatagcagtgttgtga
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