Panicum virgatum (switchgrass): 120647177
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Entry
120647177 CDS
T07260
Name
(RefSeq) probable RNA 3'-terminal phosphate cyclase-like protein
KO
K11108
RNA 3'-terminal phosphate cyclase-like protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120647177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120647177
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
90S particles
Other 90S particles
120647177
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RTC
RTC_insert
Motif
Other DBs
NCBI-GeneID:
120647177
NCBI-ProteinID:
XP_039779785
LinkDB
All DBs
Position
9K:66189347..66192819
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AA seq
377 aa
AA seq
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MGRDKTRRLSGSRHLRQRLVLATLTSTGVTIDDIRSGDAAPGLRPYEVSLLRLLDKISDR
HTIDLNETGTKLKYMPGVIQGGKGLEHDCGVHRGIGYFLEPLILLGLFAKAPISIRLKGI
TNDTKDPSVDTFRMTTLHMLKHFGVPLEGLELKIDSRGSPPLGGGEVFLRVPNINSTLTA
ANWVDEGMVKRIRGVSFSTRVSPQIESRIIYAARGIFNRFIPDVHIFTDHRSGAFGGRSP
GYGVSLVAETTTGCLLSVDATVSYPSVDEINEESEKPELMSPEDLGVQAASLLLEEVAQG
GVVDSTHQGLLFILCALCPADVSKVRVGQLTPHGIEMLRNIRDFLNVMFVIKPDPNSNTV
TLKCVGAGVKNIARKSS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggggcgagacaagacccggcgtctctccggcagccgccatctccggcagcggctggtg
ctggcgacgctcacctccaccggcgtcaccatcgatgacatccgctccggggacgccgca
ccggggctccgcccgtacgaggtctccctcctacgcctcctggacaagatctccgaccgc
cacaccatcgacctcaacgagacaggaacgaagctgaagtacatgccgggggtgattcaa
ggcgggaagggccttgagcacgactgcggggtgcaccgggggatcggctacttcctcgag
ccgcttatactgctgggcctcttcgcgaaggcgcccatatcgattcggctcaaaggaatc
actaatgatacaaaggacccttctgtggatactttccggatgacaaccttgcatatgctc
aagcattttggtgttcctttggagggtttggagctaaagattgatagccgaggatctcca
ccccttggtggtggtgaagtgtttctccgagttcccaatataaatagcacactaacggca
gcaaactgggttgatgaaggtatggtgaagaggataaggggtgtttcattctctactaga
gtatctccacagattgaaagccgcattatctatgctgcacgtggaatcttcaatcgcttc
attcctgatgttcatatattcactgatcatagatctggtgctttcggtgggaggtcacca
ggctatggtgtatcattagttgctgagaccacaacaggctgcctgctctctgtagatgcc
actgtgagttatcctagtgttgatgaaataaatgaagaatctgagaagccagagctgatg
tctccagaggatcttggtgttcaagctgcatcattgctactagaagaggtggctcaagga
ggggttgttgactctacacatcagggcctcctatttatcctgtgtgctttatgcccagct
gatgtatcaaaggttcgtgttggacagttgactccacatggtatagaaatgcttcgaaac
atcagggattttcttaacgtcatgtttgttatcaagcctgatcccaattcgaacactgtt
actttaaaatgtgtcggtgcgggagtgaagaatattgctcggaagagttcataa
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