Panicum virgatum (switchgrass): 120647190
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Entry
120647190 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 6-like
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120647190
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120647190
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120647190
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120647190
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120647190
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
PK_Tyr_Ser-Thr
EH
EF-hand_9
EF_EFCAB10_C
AIF-1
DUF5580_M
tRNA_synt_1c_R1
Kdo
Motif
Other DBs
NCBI-GeneID:
120647190
NCBI-ProteinID:
XP_039779800
LinkDB
All DBs
Position
1K:56581503..56583339
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AA seq
508 aa
AA seq
DB search
MRGGGHLQQHLSSPTAVLGHATPPLRDLYALGRKLGQGQFGTTYLCTELATGTALACKSI
AKRKLLTPEDVDDVRREIQIMHHLAGHESVVTIKGAYEDALYVHIVMELCEGGELFDRIV
DRGYFSERKAAEIARVIVGVVEACHSLGVMHRDLKPENFLLLGKDIEDGGEEEAEAEASS
SSPGIKLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLCKHYGPEADVWTAGVIIYILL
SGVPPFWAETQQGIFDAVLKGAIDFDSEPWPSISDSAKDLIRGMLRSPPADRLTAHQVLC
HPWICENGVAPDRALDPAVLSRLKHFSAMNRLKKMALRVIAQSLSEEELAGLKEMFKAMD
TDGSGAITFEELKEGLRRHGSNLRESEIRDLMDAADVDRSGTIDYDEFIAATVHMSKLER
EEHLLAAFAYFDKDGSGYITVDELEQACRDHNMTDVGIDDIIREVDQDNDGRIDYGEFVA
MMKKGIIGHGRLTMRHTSDGSVLQGAGG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcggcgggcacctgcagcagcacctctcctcccccaccgccgtgctgggccac
gccacgccgccgctgcgcgacctgtacgcgctcgggcgcaagctcgggcaggggcagttc
ggcaccacgtacctgtgcacggagctggccaccggcacggccctggcctgcaagtccatc
gccaagcgcaagctgctgacccccgaggacgtggacgacgtccggcgcgagatccagatc
atgcaccacctggcggggcacgagagcgtggtcaccatcaagggcgcctacgaggacgcg
ctgtacgtgcacatcgtcatggagctgtgcgagggcggcgagctcttcgaccgcatcgtc
gaccgcggctacttctcggagcgcaaggccgccgagatcgcccgcgtcatcgtcggcgtc
gtggaggcctgccactcgctcggggtcatgcaccgggacctcaagcccgagaactttctg
ctgcttggtaaggatatcgaggacggcggcgaggaggaggcggaggcggaggcctccagc
agcagcccgggcatcaagctcaaggccatcgacttcggtctctccgtcttcttcaagccc
ggtcaggtgttcacggacgtggtggggtccccctactacgtggcccccgaggtgctctgc
aagcactacgggcccgaggccgacgtgtggacggcgggggtcatcatctacatcctcctc
agcggcgtgccgcccttctgggccgagacgcagcagggcatcttcgacgccgtgctcaag
ggcgccatcgacttcgactcggagccctggcccagcatctccgacagcgccaaggacctc
atccgcggcatgctgcggtcgccgccggccgaccgcctcaccgcgcaccaggtgctgtgc
cacccctggatctgcgagaacggcgtcgcgcccgaccgggcgctcgacccggccgtgctc
tccaggctcaagcacttctccgccatgaaccgcctcaagaagatggcgctgcgcgtcatc
gcccagagcctctccgaggaggagctcgcggggctcaaggagatgttcaaggccatggac
acggacggcagcggcgccatcaccttcgaggagctcaaggaggggctgcgccggcacggc
tccaacctcagggagagcgagatccgggacctcatggacgccgccgacgtcgacaggagc
ggcaccatcgactacgacgagttcatcgccgccaccgtgcacatgagcaagctcgagcgc
gaggagcacctgctcgccgcattcgcctacttcgacaaggacggcagcggatacatcacc
gtcgacgagctggagcaggcctgcagggaccacaacatgacggacgtgggcatcgacgac
atcatcagggaggtggaccaggacaacgatggccgcatcgactacggcgagttcgtggcc
atgatgaagaagggcatcatcggtcacgggaggctcaccatgaggcacacctccgacggc
agcgtcctccagggcgccggcggctag
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